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Pull requests: openpipelines-bio/openpipeline
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Bump docker/login-action from 4 to 4.5.2
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#1221
opened Jul 31, 2026 by
dependabot
Bot
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Bump nf-core/setup-nextflow from 3.0.0 to 3.0.1
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#1220
opened Jul 22, 2026 by
dependabot
Bot
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Bump actions/setup-python from 6 to 7
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#1218
opened Jul 20, 2026 by
dependabot
Bot
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Always store details in
highly_variable_features_scanpy
#1186
opened May 6, 2026 by
lazappi
Contributor
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5 of 10 tasks
Store flavor in
highly_variable_features_scanpy
#1185
opened May 6, 2026 by
lazappi
Contributor
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5 of 10 tasks
Support identical fastq filenames for multiple flow cell directories.
#1172
opened Apr 22, 2026 by
DriesSchaumont
Member
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10 tasks
support for conversion of cellranger filtered h5 to h5mu
#1170
opened Apr 22, 2026 by
dorien-er
Contributor
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5 of 10 tasks
Add
calculate_marker_genes component
#1168
opened Apr 22, 2026 by
lazappi
Contributor
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5 of 10 tasks
add metadata/copy_modality_slots component
#1166
opened Apr 17, 2026 by
jakubmajercik
Collaborator
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4 of 10 tasks
add filter/create_cell_masks component
#1165
opened Apr 17, 2026 by
jakubmajercik
Collaborator
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3 of 10 tasks
Add dataflow/move_anndata_slots component
#1163
opened Apr 14, 2026 by
jakubmajercik
Collaborator
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4 of 10 tasks
ingestion/cellranger_multi: avoid publishing duplicate Cell Ranger output
#1048
opened Jul 10, 2025 by
DriesSchaumont
Member
•
Draft
4 of 10 tasks
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