Rust data structures and parser for the Uniprot database(s).
-
Updated
Oct 24, 2023 - Rust
#
swissprot
Here are 9 public repositories matching this topic...
Description of work done at Merck pharmaceutical company in the summer of 2018 as a Computational Drug Discovery Intern at West Point, PA. Information excludes all proprietary information belonging to Merck & Co.
python computer-science research xml high-performance numpy drug-discovery proteomics publication lc-ms pharmacokinetics labkey scalable-data-analysis computational-proteomics drug-targets swissprot pharmaceuticals pharmacodynamics tkinter-python drug-development
-
Updated
Mar 10, 2022 - Python
Interactive Protein Sequence Alignment Visualization
protein-structure edit-distance alignment safety protein-sequences uniprot blosum-matrix swissprot alphafold molstar
-
Updated
May 25, 2026 - TypeScript
This repository contains the link for all Position Specific Scoring Matrices(PSSMs) of all protein in SwissProt(UniProtKB)
-
Updated
Apr 9, 2022
Biomedical Few-shot Meta-learning Architectures with Classification Base Learners.
deep-learning meta-learning swissprot few-shot-learning tabula-muris fcnet classification-base-learners
-
Updated
Dec 13, 2023 - Jupyter Notebook
Comparing Support Vector Machines (machine learning) and Position-specific Weight Matrix (statistical) methods for predicting Signal Peptides in eukaryotic Proteins Sequences.
machine-learning protein-sequences support-vector-machines binary-classification sequence-analysis swissprot signal-peptide
-
Updated
Jan 13, 2025 - Jupyter Notebook
Using BLAST and Transdecoder.
-
Updated
Feb 7, 2023 - Shell
Bioinformatics capstone of the UoA DI 'Software Development for Algorithmic Problems' trilogy. Protein remote-homolog search on SwissProt-50k via ESM-2 embeddings + 6 ANN methods (brute, LSH, Hypercube, IVF-Flat, IVF-PQ, Neural LSH), benchmarked against BLAST.
bioinformatics university-project nearest-neighbor-search blast swissprot protein-search homolog-detection approximate-nearest-neighbor esm-2 neural-lsh
-
Updated
May 10, 2026 - Python
Improve this page
Add a description, image, and links to the swissprot topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the swissprot topic, visit your repo's landing page and select "manage topics."