Utility functions for modelling and simulation workflows within esqLABS organization

The physiologically-based whole-body model of the glucose-insulin-glucagon regulatory system

Umbrella repo for the ToxMCP Suite (docs, links, quickstart).

Physiologically Based Pharmacokinetic Models for Pregnant Women

Implementation of inhalation model in MoBi

MCSim Models in R

Open access PBPK modelling platform

Create diagrams with ggplot.

Whole-body PBPK model of digoxin as P-gp DDI victim drug

A Quantitative Systems Pharmacology kidney model of diabetes associated renal hyperfiltration and the effects of SGLT inhibitors.

Whole-body PBPK model of Vancomycin

MCP server for PBPK modeling workflows (simulation control + PK analytics).

Antimony/SBML re-implementation of the EuroMix Generic PBK model.

Physiology-based systems pharmacology model of thyroid hormones regulation in rat and human

Code for the paper "A Combination of Machine Learning and PBPK Modeling Approach for Pharmacokinetics Prediction of Small Molecules in Humans"

Whole-body PBPK model of voriconazole as CYP2C19 substrate and CYP3A4 perpetrator drug

An effort to reproduce the Geerts 2022 PBPK/QSP model with SBML and python. References: Geerts H, Walker M, Rose R, et al. A combined physiologically-based pharmacokinetic and quantitative systems pharmacology model for modeling amyloid aggregation in Alzheimer's disease. CPT Pharmacometrics Syst Pharmacol. 2023; 12: 444-461. doi:10.1002/psp4.1291

Deterministic direct-use and near-field external exposure MCP with auditable scenario construction and PBPK-ready handoff.