Cross-platform (Windows + Linux) no-code desktop app for reproducible bulk RNA-seq & microarray analysis: STAR/HISAT2/Salmon alignment, DESeq2/limma, GO/KEGG/g:Profiler enrichment, and STRING PPI networks — with first-class support for crops and fungi that lack a Bioconductor OrgDb.

End-to-end NGS variant calling and functional annotation pipeline for Limulus polyphemus using GATK and SnpEff, with biological interpretation of high-impact immune and metabolic variants.

HPC-T-Assembly, a scalable pipeline leveraging high-performance computing (HPC) for de novo transcriptome assembly of large, multi-species RNA-Seq datasets. This tool streamlines the assembly process, optimizing resource allocation and parallelization to handle diverse, complex transcriptomes efficiently.