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how to understand “left-align indels”

Status: Open.

#37 In tkzeng/Pangolin;

· raobin1218 opened on Aug 14, 2025

Max value for argument --distance

Status: Open.

#36 In tkzeng/Pangolin;

· yanwang271 opened on Apr 10, 2025

Segmentation fault (core dumped)

Status: Open.

#35 In tkzeng/Pangolin;

· Roshanshafiha opened on Mar 23, 2025

Query: does result vary between whole and split vcf?

Status: Open.

#34 In tkzeng/Pangolin;

· Roshanshafiha opened on Feb 23, 2025

WARNING, skipping variant

Status: Open.

#32 In tkzeng/Pangolin;

· LIKUOKUO opened on Dec 25, 2024

a downloadble database version

Status: Open.

#31 In tkzeng/Pangolin;

· snashraf opened on Dec 12, 2024

Pangolin sometimes masks gain scores where there are no splice sites annotated on the gene

Status: Open.

#29 In tkzeng/Pangolin;

· neverov-am opened on Nov 8, 2024

pangolin custom usage script output

Status: Open.

#28 In tkzeng/Pangolin;

· carmelle-cat opened on Jul 28, 2024

Pangolin exits with error if variant with wildcard character

Status: Open.

#26 In tkzeng/Pangolin;

· tsivaarumugam opened on Jul 24, 2024

WARNING, skipping variant: Variant not contained in a gene body. Do GTF/FASTA chromosome names match?

Status: Open.

#25 In tkzeng/Pangolin;

· GEsti124 opened on Jul 1, 2024

Inconsistency of predictions depending on batch size

Status: Open.

#22 In tkzeng/Pangolin;

· neverov-am opened on May 22, 2024

System/server configuration recommendation for running WGS sample with Pangolin

Status: Open.

#20 In tkzeng/Pangolin;

· tsivaarumugam opened on Apr 4, 2024