Code and analysis scripts accompanying the following preprint:
Julian LA, Crozier L, Lukow D, et al. On-target toxicity limits the efficacy of CDK11 inhibition against cancers with 1p36 deletions. bioRxiv. 2025;2025.08.03.668359. Published 2025 Aug 3. doi:10.1101/2025.08.03.668359
- Intron retention — Figure 2
- ChIP-seq analysis — Figure S4
- Biomarker analysis — Figure 4
- Network analysis
- Figure code — scripts for manuscript figures