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@typhoidgenomics Global Typhoid Genomics Consortium

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    6 repositories

    • .github

      Public
      0•0•0•0•Updated Jun 5, 2026Jun 5, 2026

    • TyphiNET

      Public
      TyphiNET online Salmonella Typhi AMR surveillance dashboard.
      JavaScript
      •
      GNU General Public License v3.0
      •2•7•0•0•Updated Feb 23, 2026Feb 23, 2026

    • TyphoidGenomicsConsortiumMykrobe

      Public
      HTML
      •0•0•0•0•Updated Sep 14, 2025Sep 14, 2025

    • genotyphi

      Public
      Assign genotypes to Salmonella Typhi genomes based on VCF files (mapped to Typhi CT18 reference genome)
      Python
      •
      GNU General Public License v3.0
      •12•30•0•5•Updated Jul 18, 2025Jul 18, 2025

    • TyphoidGenomicsConsortiumWG1

      Public
      HTML
      •
      GNU General Public License v3.0
      •2•4•0•0•Updated Sep 22, 2023Sep 22, 2023

    • scripts

      Public
      0•0•0•0•Updated Aug 12, 2023Aug 12, 2023
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