[WIP] API Changes - #14

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ogeagla wants to merge 224 commits into

octavian/api-changes

Commits on Feb 21, 2024

bump deps
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ae00a40
stabilize a couple tests
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43a2448
rename some high-level functions/records/protocols to use 'find formula' verbage
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more renaming
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39fbd8c

Commits on Feb 22, 2024

java class scaffold
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java class scaffold
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java test class scaffold
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22e17a7

Commits on Feb 23, 2024

FindFormula template from symja
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75893cd

Commits on Mar 17, 2025

bump deps; fix tests
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73dbab5

Commits on Dec 22, 2025

bump deps
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ac69792
fix typo
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79362e2
perf-oriented JVM opts + perf profile scripts
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slight perf improvement
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slight perf improvement
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fe04e41
update deptree info
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9356d25
improve GC tuning
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project meta
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98b5fa6

Commits on Dec 23, 2025

java API for closyr WIP
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java API for closyr WIP
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java API for closyr WIP
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java API for closyr WIP
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a121934
PRNG improvements
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add deterministic mode using PRNG seed / doc update for Java API
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44dbd74
reorg readme
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random-seed using PRNG improvements
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random-seed using PRNG improvements
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GUI for random-seed
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wip
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deterministic benchmark
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wip
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wip
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run junit script
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58c8919

Commits on Dec 24, 2025

simplify api
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9cebdfa
log less during tests
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fix junit test runner
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style
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style
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Commits on Dec 27, 2025

bump junit deps
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665c2be

Commits on Dec 28, 2025

random seed used in Java API
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better reporting
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couple extra datasets
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show obj fn in GUI
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use new datasets as benchmarks
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use unicode font when available to print out GUI data at the bottom
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symja obj fn text
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symja obj fn text widgets
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505c826
fix run junit tests
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readme arch diagram
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b416345

Commits on Dec 29, 2025

rare bug and test case to confirm fix
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43fe7ec
ns graph
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0c23dd9
more/better tests
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2d3f8a9
whitelist/blacklist for mutations
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whitelist/blacklist for mutations in GUI
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gui status label style
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ns graph
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gui setting to change log steps
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gui ns refactor
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gui ns refactor
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gui ns refactor
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f70060d

Commits on Dec 30, 2025

provide user with input data when they draw custom data in sketchpad
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cb8d17b
fix lein cloverage
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e0cd015
fix lein cloverage docs
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http server and webapp
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update deps
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e59fbf8

Commits on Dec 31, 2025

http tests
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server start/stop
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28c9209
webapp obj data vs best fn chart
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webapp input data editor
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UI nits
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UI nits
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efd06e4
webapp more data presets
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26bac9f
UI nits
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cae2e38
display latex of formula
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8cfee2d
latex results styling for huge formulas
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9586bdc
fix stop job which has been paused
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978df06
input data panel style (shorter)
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5b690d5
webapp ui style
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webapp job history
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webapp break up js code
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dont log report when using webapp
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better results other solns
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copy latex src popup
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show stopped jobs in job history
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can remove jobs from history
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less logging
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skip Hold() fns
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Commits on Jan 1, 2026

bump deps
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c36577e
more bench fns
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exclude mutations in webapp
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logging
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ff91c82
style
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df86a56
preset dataset badges
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preset dataset badges
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d565b30
job history seed
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4859b59

Commits on Jan 2, 2026

perf improvements in ga
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8b06b93
adaptive mutation
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1235c77
deps graph
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3357eaa
gui / cli options for adaptive mode / quiet logging
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gui / cli options for adaptive mode / quiet logging
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fce24a1
best score progression chart
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best score progression chart
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Commits on Jan 3, 2026

webapp icons
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feynman transition formula
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style
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adaptive thresholds
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edit data points chart fix
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best fn chart y range constrain
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style
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style
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eval cache wip
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eval cache wip
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eval cache java api
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logging
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tests
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c795a27

Commits on Jan 4, 2026

options for scoring method
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webapp main content make wider
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ui data fix scoring method display while job in progress
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ui data fix job history
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ui data improve
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test / lint
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49964cf

Commits on Jan 5, 2026

style
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1f0d095

Commits on Jan 6, 2026

keep going feature; continue job
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ns graph
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docs
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more fixes / logging
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disable adaptive mode during deterministic mode
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logging
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logging
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continue job uses correct config from form
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logging
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logging
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style
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style
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Commits on Jan 7, 2026

quicker input data chart updates
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docs
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scoring method badge in job history
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scoring method badge in job history only
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job history based on keep going nesting level
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job history based on keep going nesting level
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job history max nesting level
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job history max nesting level
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job history item improve/worsen badge
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job history item improve/worsen badge
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Commits on Jan 8, 2026

bump deps
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show eta and elapsed time for running job
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show eta and elapsed time for done job
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job history nesting level colors
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job history nesting level colors
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todos
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todos
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todos
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todos
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style
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todos
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todos
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todos
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Commits on Jan 9, 2026

concurrent jobs + tabbed results
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delete job trees
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default config webapp
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style
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collapse parts of job trees
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copy shortcuts style
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bump deps
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style
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todos
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todos
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style
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todos
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todos
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todos
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todos
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todos
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affd63f
fix concurrent eval cache bug
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mutation groups
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close all active jobs when you close the webapp web site
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show all scores
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trig translator
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todos
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Commits on Jan 10, 2026

sparklines for each scoring method
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job labels / names
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consistent chart domains
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todos
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todos
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can start job concurrently from main config panel
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compare running score with parent job. show all scores in history item
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job history scores
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job history delete single item preserves subtree and lifts it
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job history for stopped jobs: jobs show up in correct place in the job tree
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8da0749

Commits on Jan 11, 2026

webapp data input brushes
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bf9eba2
webapp data input brushes + fixes
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dd7a1ee
default dataset
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dataset label regresion fix
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todos
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todos
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todos
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long running fn test
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todos
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todos
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show stopped jobs in webapp UI
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wip configurable simplicity bias
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fix frontend bug
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configable simplicity bias max contribution
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configable simplicity bias fixes
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configable simplicity bias fixes
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show unbiased score
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tweak bias
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9cf0ea0

Commits on Jan 12, 2026

log
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ns graph
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add simplicity bias to eval cache key
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fix test
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ensure no thread exhaustion when doing expr processing
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style
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ec7e4c0
tweak simplicity bias config
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tweak simplicity bias config
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eb1e58e
tweak simplicity bias config
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e3ee54e
tweak simplicity bias config
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tweak simplicity bias config
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391091b
fix tests
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0657ea3
less logging during tests
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66f2174
less logging during tests
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e7600ed
shorter bench tests
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bd3cddb
todos
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8a9a5dd
format done job scores
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4d6a13b

Commits on Jan 13, 2026

show simplicity bias for updates/stopped jobs
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