Pylint ci

.github/workflows/main.yml

@@ -0,0 +1,39 @@
+
+# Same key-value pairs as in "Defining Our Workflow" section
+name: CI
+on: push
+jobs:
+  build:
+
+    # Here we add the matrices definition:
+    strategy:
+      matrix:
+        os: ["ubuntu-latest", "macos-latest", "windows-latest"]
+        python-version: ["3.10", "3.11"]
+
+    # Here we add the reference to the os matrix values
+    runs-on: ${{ matrix.os }}
+
+    # Same key-value pairs as in "Defining Our Workflow" section
+    steps:
+
+    - name: Checkout repository
+      uses: actions/checkout@v4
+
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        # Here we add the reference to the python-version matrix values
+        python-version: ${{ matrix.python-version }}
+    # Same steps as in "Defining Our Workflow" section
+    - name: Install Python dependencies
+      run: |
+        python3 -m pip install --upgrade pip
+        python3 -m pip install -r requirements.txt
+    - name: Test with PyTest
+      run: |
+        python3 -m pytest --cov=inflammation.models tests/test_models.py
+
+    - name: Check style with Pylint
+      run: |
+        python3 -m pylint --fail-under=0 --reports=y inflammation

inflammation/models.py

@@ -10,6 +10,7 @@
 import numpy as np
 
 
+
 def load_csv(filename):  
     """Load a Numpy array from a CSV
 

requirements.txt

@@ -1,18 +1,31 @@
+astroid==3.2.2
 contourpy==1.2.1
+coverage==7.5.4
 cycler==0.12.1
+dill==0.3.8
 exceptiongroup==1.2.1
 fonttools==4.53.0
 importlib_resources==6.4.0
 iniconfig==2.0.0
+isort==5.13.2
 kiwisolver==1.4.5
 matplotlib==3.9.0
+mccabe==0.7.0
 numpy==2.0.0
 packaging==24.1
+pandas==2.2.2
 pillow==10.3.0
+platformdirs==4.2.2
 pluggy==1.5.0
+pylint==3.2.3
 pyparsing==3.1.2
 pytest==8.2.2
+pytest-cov==5.0.0
 python-dateutil==2.9.0.post0
+pytz==2024.1
 six==1.16.0
 tomli==2.0.1
+tomlkit==0.12.5
+typing_extensions==4.12.2
+tzdata==2024.1
 zipp==3.19.2