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Coding at work
🧑‍💻
Coding at work
125 followers · 77 following

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loukesio/README.md

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 Hi, I'm Loukas! 👋 

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I am a data scientist working in the interface between mathematical modelling 👨‍🔬 and bioinformatics 👨‍💻, and I love coding in R, python and Javascript. I am currently a senior bioinformatics scientist at the Rainey Lab at the Max Planck Institute for Evolutionary Biology in Plön, Germany. I am passionate about making science open, so I am sharing every bit of helpful code I write.


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  1. ltc-color-palettes ltc-color-palettes Public

    Artistic and nature-inspired colour palettes for R, on CRAN as 'ltc'. Curated for clarity and impact in scientific figures.

    R 299 17

  2. barcosim barcosim Public

    Simulate barcoded amplicon sequences in R for testing clustering algorithms and forecasting sequencing outcomes before you run an experiment.

    R 2

  3. kullrich/snpless-nf kullrich/snpless-nf Public

    snpless-nf - A Nextflow pipeline for time-course analysis with bacterial NGS whole-genome data.

    HTML 14 3

  4. ggvolc ggvolc Public

    Volcano plots for differential expression in R. Reads DESeq2, edgeR and limma output directly; highlight genes of interest and compose gene tables with gt.

    R 72 4