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1. synth-pdb synth-pdb Public

   Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development

   Python 1

2. synth-nmr synth-nmr Public

   NMR spectroscopy calculations for protein structures

   Python 1

3. diff-biophys diff-biophys Public

   Differentiable biophysical modeling in JAX (SAXS, NMR, CD)

   Python

4. open-bcif open-bcif Public

   High-performance, streaming-first toolkit for manipulating and validating BinaryCIF (BCIF) files at scale. Designed for structural biology.

   Rust 1

5. synth-cryo-em synth-cryo-em Public

   Generate realistic synthetic 3D Cryo-EM densities from structural models for testing algorithms and training ML models.

   Python 1

6. synth-saxs synth-saxs Public

   A lightweight Python library for simulating Small-Angle X-ray Scattering (SAXS) profiles from protein coordinates.

   Python