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🧬 ResearchMind — Autonomous AI Scientist

HuggingFace Demo Python License

Autonomous 5-stage AI research pipeline that queries PubMed's 35M+ papers, performs RAG-based literature analysis, generates novel hypotheses, designs experiments, and produces publication-style research proposals — with zero human intervention.


Pipeline

Topic Input
  → Stage 1: PubMed Fetch      (35M+ papers, structured metadata)
  → Stage 2: RAG Indexing      (FAISS + all-MiniLM-L6-v2 embeddings)
  → Stage 3: Hypothesis Gen    (Groq LLaMA 3.1, top-3 semantic retrieval)
  → Stage 4: Experiment Design (dataset, methodology, metrics, timeline)
  → Stage 5: Research Report   (publication-style proposal + peer critique)

Folder Structure

ResearchMind/
├── app.py            ← Gradio UI entry point
├── pipeline.py       ← Core autonomous research logic
├── requirements.txt
└── README.md

Quickstart

git clone https://github.com/Vi-bha/ResearchMind
cd ResearchMind
pip install -r requirements.txt

export GROQ_API_KEY=your_key_here   # free at console.groq.com
python app.py

Open http://localhost:7860 in your browser.

Tech Stack

Component Technology
Paper Source PubMed API (35M+ papers)
Vector Store FAISS IndexFlatL2
Embeddings SentenceTransformers all-MiniLM-L6-v2 (384-dim)
LLM Groq LLaMA 3.1 8B Instant
UI Gradio 4.x

Example Output

Input: large language models medical imaging

Output includes:

  • 5 fetched PubMed papers (2023–2025) with metadata
  • RAG-based literature summary with identified research gaps
  • Novel, testable hypothesis with rationale
  • Experiment design with dataset, architecture, metrics, timeline
  • Peer critique with feasibility score
  • Full publication-style research proposal (~1,500 words)

Related Projects

Project Description Demo
PaperLens RAG pipeline for research paper Q&A 🤗 Live
MedLens Multimodal AI for prostate MRI analysis 🤗 Live

Author

Vibhavari Tummewar — M.Tech Advanced Computing, MANIT Bhopal Scopus-indexed researcher in LLM-assisted medical AI systems.

LinkedIn HuggingFace

About

Autonomous AI Scientist — fetches PubMed papers, generates hypotheses and produces research proposals

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