Skip to content
View NoushinN's full-sized avatar
:octocat:
...
:octocat:
...

Organizations

@RLadiesVicBC

Block or report NoushinN

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
NoushinN/README.md

Noushin Nabavi, PhD

Cell & Systems Biologist · Data Scientist

Turning complex biological and social questions into reproducible analysis, useful models, and evidence-informed decisions.

Portfolio GitHub X


About me

I am a cell and systems biologist and data scientist interested in how evidence, computation, and systems thinking can help us understand complex problems.

My work spans molecular and cellular biology, cancer multi-omics, reproducible data analysis, economic and policy research, and educational modelling. I enjoy translating scientific ideas into transparent analytical tools that support learning and evidence-informed decision-making.

  • 🔬 PhD in Cell & Systems Biology from the University of Toronto
  • 🧬 Research experience in stem cells, aging, pharmacology, and cancer genomics
  • 📊 Experience applying data science to public policy and economic analysis
  • 🧩 Current interests include complexity, emergence, artificial life, and scientific education
  • 📍 Based in Victoria, British Columbia, Canada

Current focus

  • Developing educational R tools for exploring emergence and complex systems
  • Building simplified models of artificial life, self-organization, and agent interaction
  • Creating accessible resources for experimentation and evidence-based decision-making
  • Exploring reproducible approaches to biological, social, and policy questions

Featured work

An educational R package for exploring emergence, self-organization, cellular automata, agent interactions, and network growth.

Documentation · Getting started

An educational toolkit for examining simplified artificial-life concepts, including agents, resources, metabolism-like constraints, reproduction, and population dynamics.

Documentation · Resource competition tutorial

An open learning resource developed for the Government of Canada's Experimentation Works program, covering problem definition, research questions, stakeholder engagement, and experimental design in the public service.

Earlier collaborative projects

Toolkit

Animated overview of Noushin's areas of expertise

The visualization presents broad areas of experience and current focus; it is not intended as a numerical proficiency score.

R Python RStudio SQL Git GitHub Markdown Reproducible research Data visualization Bioinformatics

Research journey

My scientific work began in cell and molecular biology and developed through research on bone differentiation, microgravity-related bone loss, aging, drug metabolism, and rare-cancer multi-omics. I later brought that scientific perspective into public-sector data science, economics, policy analysis, and experimentation.

Across these areas, one principle remains constant: methods should be transparent, evidence should be interpreted carefully, and analytical work should be useful to others.

Beyond the code

I am also interested in science communication, open knowledge, human rights, and the relationship between complex systems, life, and consciousness. Away from the screen, I enjoy travelling, hiking, dancing, writing, painting, and photography.


Explore more

Visit my portfolio for my biography, publications, professional activities, and other work.

Pinned Loading

  1. Anatomy-of-Morbidity Anatomy-of-Morbidity Public

    Hackseq Hackathon Project, UBC, October 2018

    5

  2. bcgov/bc-econ-status-indices bcgov/bc-econ-status-indices Public

    R scripts to use tidied statscan taxdata and develop area-based economic indices for British Columbia.

    R 1

  3. reproducible_workflows reproducible_workflows Public

    EW2 - workshop on reproducible workflows for Experimentation Works cohort as part of the Learning Event Series

    HTML 2

  4. quantum-particle-physics-lab quantum-particle-physics-lab Public

    A beginner-friendly Streamlit app for learning quantum physics, quantum computing, and particle physics with visualizations, quizzes, notebooks, worksheets, and particle data.

    Jupyter Notebook 1

  5. lifesimulatoR lifesimulatoR Public

    lifeSimulatoR is an R package for simulating simplified origin-of-life scenarios, including prebiotic chemistry, molecular replication, mutation, selection, and the emergence of complexity in evolv…

    R 1

  6. emergenceModelR emergenceModelR Public

    Educational R package for simulating and visualizing emergence, self-organization, complexity, agent interactions, cellular automata, and network growth. Includes core tutorials and a theory guide …

    R 1