Add birth, arrival and conception lookups and relax entry validation - #6
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labkey-martyp wants to merge 6 commits into
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Add birth, arrival and conception lookups and relax entry validation#6labkey-martyp wants to merge 6 commits into
labkey-martyp wants to merge 6 commits into
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Adds birth condition, delivery mode and conception breeding type, recodes the source and pregnancy result lookups to alpha codes with the arrival and departure foreign keys following, and relaxes required-field validation on the arrival and birth entry forms for bulk data loads.
Project and protocol are now entered through the Project Assignment and Protocol Assignment sections rather than as fields on the birth and arrival forms, and demographics source is read from the arrival record instead of its own demographics column. Species and gender reference data is replaced with the codes NBRI uses, and group status and status code lookups are registered.
…fb_birth_arrival_updates
Breeding type describes the birth rather than the conception, so the column moves from the conception table to the birth dataset and entry form. The lookup also gains a project breeding value and switches the not-assigned code from 0 to O.
Offspring are aggregated per conception so multiple births for one conception don't duplicate rows.
The Births section gains a Start with Conception button that adds a row carrying the conception's Id, dam, sire and the dam's species. Its columns are also reordered, with Id, birth date, conception Id, species and sex now required.
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Rationale
Adds the fields and lookup codes needed to bulk load historical birth, arrival and conception records into the NBRI EHR. The legacy source system keys its source, species and pregnancy-outcome lookups by short alpha codes rather than the numeric placeholders the module was seeded with, so those lookups have to be recoded before incoming values will resolve. The historical records also predate several of the required-field rules on the current entry forms.
Related Pull Requests
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