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Include custom ratio numbers in output table. #49

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Merged
AlistairCurd merged 1 commit into from
May 31, 2026
Merged

Include custom ratio numbers in output table. #49

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12 changes: 11 additions & 1 deletion src/perpl/run_distance_modelling.py
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Original file line number Diff line number Diff line change
Expand Up @@ -383,14 +383,24 @@ def main(argv=None):
continue
x_expt, y_expt, fitted_model = model_out

if model_config["dist_ratios"] == "custom_ratios":
custom_ratios = model_config["custom_ratios_list"]
dist_ratios_for_table = ""
for i, item in enumerate(custom_ratios):
dist_ratios_for_table += f"{item}"
if (i + 1) < len(custom_ratios):
dist_ratios_for_table += ", "
else:
dist_ratios_for_table = model_config["dist_ratios"]

model_results.append(
{
"Name": model_file.rstrip(".yaml"),
"Fit length": fitlength,
x_kernel_col: bin_or_kernel,
"N Peaks": model_config["n_peaks"],
"Peak ratios": model_config["peak_amps"],
"Model distance ratios": model_config["dist_ratios"],
"Model distance ratios": dist_ratios_for_table,
"Repeated localisations": model_config["repeats"],
"Background model": model_config["background"],
"AICc": fitted_model.aic_corrected,
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