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First full attempt at tokamak_stability use case#26

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ajtritt merged 13 commits into
mainfrom
fusion_example
Jun 26, 2026
Merged

First full attempt at tokamak_stability use case#26
ajtritt merged 13 commits into
mainfrom
fusion_example

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@kparfrey

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Includes an agent skill and a readme with an example session. Truststore (for zscaler mitigation) is now an optional dependency in pyproject.toml but dsagt/init.py does attempt to use it in a try/except block. This should merge automatically.

Kyle added 13 commits May 5, 2026 17:40
… module writes diagnostic messages to stdout through the C/fortran libraries. These can't be suppressed and contaminate json output. The solution is to write json output to a file. The agent is instructed to do this when building CLI tools from these pythong functions.
…ting so that it no longer uses fpy, the safety factor plot being corrected, and better setting of the dynamic range when plotting spectra.
…veral improvements. Nearly all of the plots appear to work now.
…nd moved the documentation to the skill's references/ subdirectory. Added AGENTS.md to direct the dsagt agent to the skill. Added README.md with an example session using m3d-c1 data. Updated several tools and added new function to hdf5.py for storing JSON data as HDF5.
@ajtritt ajtritt merged commit c52b269 into main Jun 26, 2026
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2 participants