Make PubChem datasets **dynamic** / Remove unsupported PubChem classes#167
Open
sfluegel05 wants to merge 3 commits intodevfrom
Open
Make PubChem datasets **dynamic** / Remove unsupported PubChem classes#167sfluegel05 wants to merge 3 commits intodevfrom
sfluegel05 wants to merge 3 commits intodevfrom
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
PubChem is now a subclass of _DynamicDataset. This means that, instead of
train.pkl,validation.pklandtest.pkl, the pubchem dataset consists ofdata.pklandsplits.csv.To make maintenance clearer and avoid confusion, I removed outdated / duplicated classes (e.g.
PubchemChemandPubchemTokensdid nothing except adding a reader which was already included in thePubChemclass)closes #165