From a442135e0aad90769914961f5c32ac10520d3763 Mon Sep 17 00:00:00 2001 From: Luke Schreiber <131496683+Luke-Schreiber@users.noreply.github.com> Date: Tue, 10 Mar 2026 15:08:13 -0600 Subject: [PATCH 1/2] Update publications, status, etc. --- apps/docs-website/docs/publications.md | 9 ++++++++ apps/docs-website/docs/status-and-versions.md | 3 +++ apps/docs-website/docs/version-log.md | 16 ------------- apps/docs-website/sidebars.ts | 23 ++++++++++++++----- 4 files changed, 29 insertions(+), 22 deletions(-) create mode 100644 apps/docs-website/docs/publications.md create mode 100644 apps/docs-website/docs/status-and-versions.md delete mode 100644 apps/docs-website/docs/version-log.md diff --git a/apps/docs-website/docs/publications.md b/apps/docs-website/docs/publications.md new file mode 100644 index 00000000..de4059a5 --- /dev/null +++ b/apps/docs-website/docs/publications.md @@ -0,0 +1,9 @@ +# Publications + +- [**QUILPEN Provides Independent and Label-Free Single-Cell Quantification of Pigmentation Dynamics and Organelle Content**](https://onlinelibrary.wiley.com/doi/10.1111/pcmr.70080) + +- [**Aardvark: A Visualization Tool for Live Cell Microscopy Data** + 🏆 *Best Paper Award: IEEE VIS 2024*](https://vdl.sci.utah.edu/publications/2024_vis_aardvark/) + +- [**Loon: A Visualization Tool for Live Cell Microscopy Data** + 🏆 *Honorable Mention Award: IEEE VIS 2021*](https://loon.sci.utah.edu/) diff --git a/apps/docs-website/docs/status-and-versions.md b/apps/docs-website/docs/status-and-versions.md new file mode 100644 index 00000000..5813ba29 --- /dev/null +++ b/apps/docs-website/docs/status-and-versions.md @@ -0,0 +1,3 @@ +# Status & Versions + +Loon is not currently being actively maintained, but feel free to reach out [here](/docs/help-develop-loon/index) to help develop loon! We maintain multiple versions of Loon through our [docker hub image](https://hub.docker.com/r/visdesignlab/loon) \ No newline at end of file diff --git a/apps/docs-website/docs/version-log.md b/apps/docs-website/docs/version-log.md deleted file mode 100644 index 16a44875..00000000 --- a/apps/docs-website/docs/version-log.md +++ /dev/null @@ -1,16 +0,0 @@ -# Version Log - -### [1.9:  _Latest_](https://hub.docker.com/r/visdesignlab/local-loon) ->Introduces the _Exemplar View_ ->- Cells of interest can be quickly identified from condition populations - -### [1.8](https://hub.docker.com/r/visdesignlab/local-loon) ->Bug fixes in _Condition Selector View_ -> - Colors of rows and columns match -> - Type checks for conditions - -### [1.7](https://hub.docker.com/r/visdesignlab/local-loon) -> Adds exporting of _Line Chart View_ as an `.svg` - -### [1.6](https://hub.docker.com/r/visdesignlab/local-loon) -> User can set custom axes domain ranges for _Line Chart View_ \ No newline at end of file diff --git a/apps/docs-website/sidebars.ts b/apps/docs-website/sidebars.ts index 4e372354..719af5e9 100644 --- a/apps/docs-website/sidebars.ts +++ b/apps/docs-website/sidebars.ts @@ -26,12 +26,14 @@ const sidebars: SidebarsConfig = { id: "getting-started-with-loon/index", }, items: [ - {type: "category", label: "Prepare Your Data", link: {type: "doc", id: "getting-started-with-loon/data",}, items: [ - "getting-started-with-loon/trackmate-data",]}, + { + type: "category", label: "Prepare Your Data", link: { type: "doc", id: "getting-started-with-loon/data", }, items: [ + "getting-started-with-loon/trackmate-data",] + }, "getting-started-with-loon/quickstart", - { - type: "category", - label: "Extra Resources", + { + type: "category", + label: "Extra Resources", link: { type: "generated-index" }, items: [ "troubleshooting-docker", @@ -44,7 +46,16 @@ const sidebars: SidebarsConfig = { type: "html", value: '
', }, - "version-log", + { + type: "doc", + id: "status-and-versions", + label: "Status & Versions", + }, + { + type: "doc", + id: "publications", + label: "Publications", + }, "help-develop-loon/index", "contact-us", ], From 1589e8502d6f7cb66e5d2c5e27ecdd888d6e5f85 Mon Sep 17 00:00:00 2001 From: Luke Schreiber <131496683+Luke-Schreiber@users.noreply.github.com> Date: Tue, 10 Mar 2026 15:49:27 -0600 Subject: [PATCH 2/2] Fix publications --- apps/docs-website/docs/publications.md | 8 +++++++- apps/docs-website/docs/status-and-versions.md | 2 +- 2 files changed, 8 insertions(+), 2 deletions(-) diff --git a/apps/docs-website/docs/publications.md b/apps/docs-website/docs/publications.md index de4059a5..950a185b 100644 --- a/apps/docs-website/docs/publications.md +++ b/apps/docs-website/docs/publications.md @@ -1,9 +1,15 @@ # Publications -- [**QUILPEN Provides Independent and Label-Free Single-Cell Quantification of Pigmentation Dynamics and Organelle Content**](https://onlinelibrary.wiley.com/doi/10.1111/pcmr.70080) +#### Loon Publications - [**Aardvark: A Visualization Tool for Live Cell Microscopy Data** 🏆 *Best Paper Award: IEEE VIS 2024*](https://vdl.sci.utah.edu/publications/2024_vis_aardvark/) - [**Loon: A Visualization Tool for Live Cell Microscopy Data** 🏆 *Honorable Mention Award: IEEE VIS 2021*](https://loon.sci.utah.edu/) + +#### User Publications + +- [**QUILPEN Provides Independent and Label-Free Single-Cell Quantification of Pigmentation Dynamics and Organelle Content**](https://onlinelibrary.wiley.com/doi/10.1111/pcmr.70080) + +- [**A BRN2:MYC transcriptional axis regulates interconversion between therapy-resistant and tumorigenic phenotypes in melanoma**](https://www.cell.com/cell-reports/fulltext/S2211-1247(25)01447-0) \ No newline at end of file diff --git a/apps/docs-website/docs/status-and-versions.md b/apps/docs-website/docs/status-and-versions.md index 5813ba29..08afe2ef 100644 --- a/apps/docs-website/docs/status-and-versions.md +++ b/apps/docs-website/docs/status-and-versions.md @@ -1,3 +1,3 @@ # Status & Versions -Loon is not currently being actively maintained, but feel free to reach out [here](/docs/help-develop-loon/index) to help develop loon! We maintain multiple versions of Loon through our [docker hub image](https://hub.docker.com/r/visdesignlab/loon) \ No newline at end of file +Loon is not currently being actively maintained, but feel free to reach out [here](/docs/help-develop-loon) to help develop loon! We maintain multiple versions of Loon through our [docker hub image](https://hub.docker.com/r/visdesignlab/loon) \ No newline at end of file