- Added
number_of_binssupport tobw_trackso bigWig summaries can be controlled by bin count instead of onlybinsize. - Added
fillstyle support tobw_trackand improved handling of constant ranges and single-bin small regions. - Added optional
nans_to_zerosand signaltransformcontrols for bigWig plotting. - Added on-the-fly bigWig
operationsupport withsecond_bw, including expressions such asfile - second_fileandlog2((1 + file) / (1 + second_file)).
- Improved
gene_trackrow assignment so genes and labels are laid out using occupied genomic spans instead of simple round-robin rows. - Made automatic gene labels more conservative in dense regions. Labels are shown only when they fit the available rows; dense views keep gene structure readable instead of forcing overlapping names.
- Added
max_labelsandall_labels_insidecontrols for gene label behavior. - Preserved explicit
show_labelnames as priority labels while suppressing crowded automatic labels. - Included genes that overlap the plotted region even when their start or end falls outside the view.