Taskfile.yml

# https://taskfile.dev

version: "3"

tasks:
  default:
    cmds:
      - task -l
    silent: true

  # =============================================================================
  # Per-package test tasks
  # =============================================================================

  test:oidm-common:
    desc: "Test oidm-common package (no callouts)"
    cmds:
      - uv run --package oidm-common pytest packages/oidm-common/tests -rs -m "not callout" {{.CLI_ARGS}}
    silent: true

  test:oidm-common-full:
    desc: "Test oidm-common package (with callouts)"
    cmds:
      - uv run --package oidm-common pytest packages/oidm-common/tests -rs {{.CLI_ARGS}}
    silent: true

  test:anatomic:
    desc: "Test anatomic-locations package"
    cmds:
      - uv run --package anatomic-locations pytest packages/anatomic-locations/tests -rs {{.CLI_ARGS}}
    silent: true

  test:findingmodel:
    desc: "Test findingmodel package (no callouts)"
    cmds:
      - uv run --package findingmodel pytest packages/findingmodel/tests -rs -m "not callout" {{.CLI_ARGS}}
    silent: true

  test:findingmodel-full:
    desc: "Test findingmodel package (with callouts)"
    cmds:
      - uv run --package findingmodel pytest packages/findingmodel/tests -rs {{.CLI_ARGS}}
    silent: true

  test:findingmodel-ai:
    desc: "Test findingmodel-ai package (no callouts)"
    cmds:
      - uv run --package findingmodel-ai pytest packages/findingmodel-ai/tests -rs -m "not callout" {{.CLI_ARGS}}
    silent: true

  test:findingmodel-ai-full:
    desc: "Test findingmodel-ai package (with callouts)"
    env:
      PYDANTIC_ALLOW_MODEL_REQUESTS: "1"
    cmds:
      - uv run --package findingmodel-ai pytest packages/findingmodel-ai/tests -rs {{.CLI_ARGS}}
    silent: true

  test:maintenance:
    desc: "Test oidm-maintenance package"
    cmds:
      - uv run --package oidm-maintenance pytest packages/oidm-maintenance/tests -rs {{.CLI_ARGS}}
    silent: true

  # =============================================================================
  # Aggregate test tasks
  # =============================================================================

  test:
    desc: "Test all packages (no callouts)"
    cmds:
      - echo "Testing all packages (excluding callouts)..."
      - task: test:oidm-common
      - task: test:anatomic
      - task: test:findingmodel
      - task: test:findingmodel-ai
      - task: test:maintenance
    silent: true

  test-full:
    desc: "Test all packages (with callouts)"
    cmds:
      - echo "Testing all packages (including callouts)..."
      - task: test:oidm-common-full
      - task: test:anatomic
      - task: test:findingmodel-full
      - task: test:findingmodel-ai-full
      - task: test:maintenance
    silent: true

  evals:
    desc: "Run all agent evaluation suites"
    cmds:
      - echo "Running all agent evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.model_editor
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.similar_models
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.ontology_match
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.anatomic_search
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.markdown_in
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.finding_description
    silent: true

  evals:model_editor:
    desc: "Run model_editor evaluation suite"
    cmds:
      - echo "Running model_editor evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.model_editor
    silent: true

  evals:similar_models:
    desc: "Run similar_models evaluation suite"
    cmds:
      - echo "Running similar_models evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.similar_models
    silent: true

  evals:ontology_match:
    desc: "Run ontology_match evaluation suite"
    cmds:
      - echo "Running ontology_match evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.ontology_match
    silent: true

  evals:anatomic_search:
    desc: "Run anatomic_search evaluation suite"
    cmds:
      - echo "Running anatomic_search evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.anatomic_search
    silent: true

  evals:markdown_in:
    desc: "Run markdown_in evaluation suite"
    cmds:
      - echo "Running markdown_in evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.markdown_in
    silent: true

  evals:finding_description:
    desc: "Run finding_description evaluation suite"
    cmds:
      - echo "Running finding_description evaluations..."
      - PYTHONPATH=packages/findingmodel-ai uv run python -m evals.finding_description
    silent: true

  check:
    desc: "Check all packages (format, lint, type-check)"
    cmds:
      - echo "Checking all packages..."
      - uv run ruff format packages/
      - uv run ruff check --fix packages/
      - uv run mypy
    silent: true

  # =============================================================================
  # Build and publish tasks
  # =============================================================================

  build:packages:
    desc: "Build all publishable packages"
    cmds:
      - rm -rf dist/
      - uv build --package oidm-common
      - uv build --package findingmodel
      - uv build --package anatomic-locations
      - uv build --package findingmodel-ai

  verify:install:
    desc: "Build and verify packages install correctly in isolation"
    cmds:
      - uv run scripts/verify-install.py

  publish:pypi:
    desc: "Publish packages to PyPI (in dependency order)"
    deps: [build:packages]
    cmds:
      - uv publish dist/oidm_common-*.tar.gz dist/oidm_common-*.whl
      - uv publish dist/findingmodel-[0-9]*.tar.gz dist/findingmodel-[0-9]*.whl
      - uv publish dist/anatomic_locations-*.tar.gz dist/anatomic_locations-*.whl
      - uv publish dist/findingmodel_ai-*.tar.gz dist/findingmodel_ai-*.whl