Description of the bug
Mapdamage plots are produced even when no mapdamage is getting executed
Steps to reproduce
git checkout dev
nextflow run main.nf -profile test_microbial,singularity -w ./work --outdir ./out_test_microbial
--> check multiqc_report.html
Expected behaviour
Output plots should only come from tools executed
Description of the bug
Mapdamage plots are produced even when no mapdamage is getting executed
Steps to reproduce
git checkout dev
nextflow run main.nf -profile test_microbial,singularity -w ./work --outdir ./out_test_microbial
--> check multiqc_report.html
Expected behaviour
Output plots should only come from tools executed