Error with GetSignalingPartners

[alevigi]

Hello!!

When I try running the GetSignalingParnters using the ligand/receptor provided by the tool I get the following error:
Error in makePSOCKcluster(names = spec, ...) :
Cluster setup failed. 1 worker of 1 failed to connect.

Also, how can I construct the ligand/receptor lists for other genes?

Thanks in advance for your help.

BW

Ale

[mkarikom]

hi, this sounds like an issue with parallel
please try updating to R v.4.x and recompiling the various r-lib deps, (eg parallel).
this guide should work fine:
https://medium.com/@hpgomide/how-to-update-your-r-3-x-to-the-r-4-x-in-your-linux-ubuntu-46e2209409c3