From 525aad8c6640bc0538c64a7128f13c6733fd9729 Mon Sep 17 00:00:00 2001
From: Matthias Schulte-Althoff <matthias@schulte-althoff.de>
Date: Mon, 24 Jun 2024 11:51:36 +0200
Subject: [PATCH 1/4] model fix

---
 inflammation/models.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/inflammation/models.py b/inflammation/models.py
index 5169ac42d..0d7effa84 100644
--- a/inflammation/models.py
+++ b/inflammation/models.py
@@ -10,6 +10,7 @@
 import numpy as np
 
 
+
 def load_csv(filename):  
     """Load a Numpy array from a CSV
 

From 299d49c9d2bb33326f85e28fb6b32a26889bfe11 Mon Sep 17 00:00:00 2001
From: Matthias Schulte-Althoff <matthias@schulte-althoff.de>
Date: Thu, 4 Jul 2024 13:27:38 +0200
Subject: [PATCH 2/4] Add Pylint autotest

---
 .github/workflows/main.yml | 39 ++++++++++++++++++++++++++++++++++++++
 1 file changed, 39 insertions(+)
 create mode 100644 .github/workflows/main.yml

diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
new file mode 100644
index 000000000..917014b98
--- /dev/null
+++ b/.github/workflows/main.yml
@@ -0,0 +1,39 @@
+ 
+# Same key-value pairs as in "Defining Our Workflow" section
+name: CI
+on: push
+jobs:
+  build:
+
+    # Here we add the matrices definition:
+    strategy:
+      matrix:
+        os: ["ubuntu-latest", "macos-latest", "windows-latest"]
+        python-version: ["3.10", "3.11"]
+
+    # Here we add the reference to the os matrix values
+    runs-on: ${{ matrix.os }}
+
+    # Same key-value pairs as in "Defining Our Workflow" section
+    steps:
+
+    - name: Checkout repository
+      uses: actions/checkout@v4
+
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        # Here we add the reference to the python-version matrix values
+        python-version: ${{ matrix.python-version }}
+    # Same steps as in "Defining Our Workflow" section
+    - name: Install Python dependencies
+      run: |
+        python3 -m pip install --upgrade pip
+        python3 -m pip install -r requirements.txt
+    - name: Test with PyTest
+      run: |
+        python3 -m pytest --cov=catchment.models tests/test_models.py
+
+    - name: Check style with Pylint
+      run: |
+        python3 -m pylint --fail-under=0 --reports=y inflammation

From 86918f0378021ece8ccb4ca4fc3331ea6a1ff6f2 Mon Sep 17 00:00:00 2001
From: Matthias Schulte-Althoff <matthias@schulte-althoff.de>
Date: Thu, 4 Jul 2024 13:30:17 +0200
Subject: [PATCH 3/4] Add Pylint autotest2

---
 .github/workflows/main.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 917014b98..0c818e8a6 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -32,7 +32,7 @@ jobs:
         python3 -m pip install -r requirements.txt
     - name: Test with PyTest
       run: |
-        python3 -m pytest --cov=catchment.models tests/test_models.py
+        python3 -m pytest --cov=inflammation.models tests/test_models.py
 
     - name: Check style with Pylint
       run: |

From 0387bfd8cfe05c1986edc8426345556fc5e6b4b3 Mon Sep 17 00:00:00 2001
From: Matthias Schulte-Althoff <matthias@schulte-althoff.de>
Date: Thu, 4 Jul 2024 13:31:54 +0200
Subject: [PATCH 4/4] Change req

---
 requirements.txt | 13 +++++++++++++
 1 file changed, 13 insertions(+)

diff --git a/requirements.txt b/requirements.txt
index 8ec797e19..f6aa28154 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,18 +1,31 @@
+astroid==3.2.2
 contourpy==1.2.1
+coverage==7.5.4
 cycler==0.12.1
+dill==0.3.8
 exceptiongroup==1.2.1
 fonttools==4.53.0
 importlib_resources==6.4.0
 iniconfig==2.0.0
+isort==5.13.2
 kiwisolver==1.4.5
 matplotlib==3.9.0
+mccabe==0.7.0
 numpy==2.0.0
 packaging==24.1
+pandas==2.2.2
 pillow==10.3.0
+platformdirs==4.2.2
 pluggy==1.5.0
+pylint==3.2.3
 pyparsing==3.1.2
 pytest==8.2.2
+pytest-cov==5.0.0
 python-dateutil==2.9.0.post0
+pytz==2024.1
 six==1.16.0
 tomli==2.0.1
+tomlkit==0.12.5
+typing_extensions==4.12.2
+tzdata==2024.1
 zipp==3.19.2