Hello,
As a novice user, I did lost a bit of time on a specific thing
PanACoTA pangenome -l UpdatedList_V4
it seems that the temporary file ViPa.All.prt should be used only when requested by the user and not by default. Alternatively, a warning could be added, since the -l UpdatedList_V4 option is no longer taken into account.
Hello,
As a novice user, I did lost a bit of time on a specific thing
PanACoTA pangenome -l UpdatedList_V4it seems that the temporary file
ViPa.All.prtshould be used only when requested by the user and not by default. Alternatively, a warning could be added, since the-l UpdatedList_V4option is no longer taken into account.