From 0752559ef773495c2fd3450b4dc7b82c6c8dcac9 Mon Sep 17 00:00:00 2001 From: Andrew Bolyachevets Date: Mon, 17 Nov 2025 09:40:54 -0800 Subject: [PATCH] use cloudsql (#1931) * use cloudsql * fix build --- jobs/notebook-report/.env.smample | 29 +- jobs/notebook-report/Dockerfile | 89 +- jobs/notebook-report/devops/vaults.gcp.env | 10 +- jobs/notebook-report/poetry.lock | 1357 ++++++++++------- jobs/notebook-report/pyproject.toml | 10 +- jobs/notebook-report/run.sh | 2 +- jobs/notebook-report/src/config.py | 24 +- jobs/notebook-report/src/daily/daily.ipynb | 129 +- jobs/notebook-report/src/notebookreport.py | 25 +- .../src/weekly/weeklynamex.ipynb | 165 +- 10 files changed, 1137 insertions(+), 703 deletions(-) diff --git a/jobs/notebook-report/.env.smample b/jobs/notebook-report/.env.smample index 7fb7c7890..150c0bb08 100644 --- a/jobs/notebook-report/.env.smample +++ b/jobs/notebook-report/.env.smample @@ -1,17 +1,16 @@ -export NAMEX_DATABASE_USERNAME= -export NAMEX_DATABASE_PASSWORD= -export NAMEX_DATABASE_NAME= -export NAMEX_DATABASE_HOST= -export NAMEX_DATABASE_PORT= +DATABASE_NAME= +DATABASE_USERNAME= +DATABASE_INSTANCE_CONNECTION_NAME= +DATABASE_SCHEMA= -export APP_FILE= -export DAILY_REPORT_RECIPIENTS= #- comma separated without any space between recipient emails -export WEEKLY_REPORT_NAMEX_RECIPIENTS= #- comma separated without any space between recipient emails -export WEEK_REPORT_DATE= #- e.g [0,1] means running on Monday and Tuesday -export ERROR_EMAIL_RECIPIENTS= #- comma separated without any space between recipient emails -export ENVIRONMENT= +APP_FILE= +DAILY_REPORT_RECIPIENTS= #- comma separated without any space between recipient emails +WEEKLY_REPORT_NAMEX_RECIPIENTS= #- comma separated without any space between recipient emails +WEEK_REPORT_DATE= #- e.g [0,1] means running on Monday and Tuesday +ERROR_EMAIL_RECIPIENTS= #- comma separated without any space between recipient emails +ENVIRONMENT= -export NOTIFY_API_URL= -export KEYCLOAK_CLIENT_ID= -export KEYCLOAK_CLIENT_SECRET= -export KEYCLOAK_AUTH_TOKEN_URL= \ No newline at end of file +NOTIFY_API_URL= +KEYCLOAK_CLIENT_ID= +KEYCLOAK_CLIENT_SECRET= +KEYCLOAK_AUTH_TOKEN_URL= \ No newline at end of file diff --git a/jobs/notebook-report/Dockerfile b/jobs/notebook-report/Dockerfile index f7d5b1f8c..12f8a5ac6 100644 --- a/jobs/notebook-report/Dockerfile +++ b/jobs/notebook-report/Dockerfile @@ -1,5 +1,4 @@ -FROM python:3.12.2 -USER root +FROM python:3.12-slim AS development_build ARG VCS_REF="missing" ARG BUILD_DATE="missing" @@ -8,38 +7,38 @@ ENV VCS_REF=${VCS_REF} ENV BUILD_DATE=${BUILD_DATE} LABEL org.label-schema.vcs-ref=${VCS_REF} \ - org.label-schema.build-date=${BUILD_DATE} + org.label-schema.build-date=${BUILD_DATE} \ + vendor="BCROS" USER root ARG APP_ENV \ - # Needed for fixing permissions of files created by Docker: - UID=1000 \ - GID=1000 + # Needed for fixing permissions of files created by Docker: + UID=1000 \ + GID=1000 ENV APP_ENV=${APP_ENV} \ - # python: - PYTHONFAULTHANDLER=1 \ - PYTHONUNBUFFERED=1 \ - PYTHONHASHSEED=random \ - PYTHONDONTWRITEBYTECODE=1 \ - # pip: - PIP_NO_CACHE_DIR=1 \ - PIP_DISABLE_PIP_VERSION_CHECK=1 \ - PIP_DEFAULT_TIMEOUT=100 \ - PIP_ROOT_USER_ACTION=ignore \ - # poetry: - POETRY_VERSION=1.3.2 \ - POETRY_NO_INTERACTION=1 \ - POETRY_VIRTUALENVS_CREATE=false \ - POETRY_CACHE_DIR='/var/cache/pypoetry' \ - POETRY_HOME='/usr/local' + # python: + PYTHONFAULTHANDLER=1 \ + PYTHONUNBUFFERED=1 \ + PYTHONHASHSEED=random \ + PYTHONDONTWRITEBYTECODE=1 \ + # pip: + PIP_NO_CACHE_DIR=1 \ + PIP_DISABLE_PIP_VERSION_CHECK=1 \ + PIP_DEFAULT_TIMEOUT=100 \ + PIP_ROOT_USER_ACTION=ignore \ + # poetry: + POETRY_VERSION=2.1.3 \ + POETRY_NO_INTERACTION=1 \ + POETRY_VIRTUALENVS_CREATE=false \ + POETRY_CACHE_DIR='/var/cache/pypoetry' \ + POETRY_HOME='/usr/local' SHELL ["/bin/bash", "-eo", "pipefail", "-c"] -# Install system dependencies RUN apt-get update && apt-get upgrade -y \ - && apt-get install --no-install-recommends -y \ + && apt-get install --no-install-recommends -y \ bash \ brotli \ build-essential \ @@ -48,35 +47,41 @@ RUN apt-get update && apt-get upgrade -y \ git \ libpq-dev \ wait-for-it \ - && curl -sSL 'https://install.python-poetry.org' | python - \ - && poetry --version \ - && apt-get purge -y --auto-remove -o APT::AutoRemove::RecommendsImportant=false \ - && apt-get clean -y && rm -rf /var/lib/apt/lists/* + && curl -sSL 'https://install.python-poetry.org' | python - \ + && poetry --version \ + # Cleaning cache: + && apt-get purge -y --auto-remove -o APT::AutoRemove::RecommendsImportant=false \ + && apt-get clean -y && rm -rf /var/lib/apt/lists/* -# Setup the application directory WORKDIR /code + RUN groupadd -g "${GID}" -r web \ - && useradd -d '/code' -g web -l -r -u "${UID}" web \ - && chown web:web -R '/code' + && useradd -d '/code' -g web -l -r -u "${UID}" web \ + && chown web:web -R '/code' -# Copy the application code and scripts COPY --chown=web:web . /code -RUN chmod 755 /code/run.sh - -# Echo the current Poetry configuration -RUN echo "Checking Poetry configurations..." \ - && poetry config --list -# Initialize project and install dependencies +COPY --chown=web:web ./run.sh /code/run.sh +RUN chmod 755 /code/run.sh +# Project initialization: RUN --mount=type=cache,target="$POETRY_CACHE_DIR" \ - echo "Installing dependencies under APP_ENV=$APP_ENV..." \ - && poetry run pip install -U pip \ - && poetry install $(if [ -z ${APP_ENV+x} ] || [ "$APP_ENV" = 'production' ]; then echo '--only main'; fi) \ + echo "$APP_ENV" \ + && poetry version \ + && poetry config installer.max-workers 1 \ + # Install deps: + && poetry run pip install -U pip \ + && poetry install \ + $(if [ -z ${APP_ENV+x} ] | [ "$APP_ENV" = 'production' ]; then echo '--only main'; fi) \ --no-interaction --no-ansi -# Switch to the non-root user +# Running as non-root user: USER web +# Stage 2: Production image (lighter) +FROM development_build AS production_build +COPY --chown=web:web . /code +RUN chmod -R 755 /code/run.sh + EXPOSE 8080 CMD [ "/bin/sh", "/code/run.sh" ] \ No newline at end of file diff --git a/jobs/notebook-report/devops/vaults.gcp.env b/jobs/notebook-report/devops/vaults.gcp.env index 3d9e26f9d..4a4c7dc98 100644 --- a/jobs/notebook-report/devops/vaults.gcp.env +++ b/jobs/notebook-report/devops/vaults.gcp.env @@ -1,8 +1,7 @@ -NAMEX_DATABASE_UNIX_SOCKET="op://database/$APP_ENV/namex-db-gcp/DATABASE_UNIX_SOCKET" -NAMEX_DATABASE_NAME="op://database/$APP_ENV/namex-db-gcp/DATABASE_NAME" -NAMEX_DATABASE_PASSWORD="op://database/$APP_ENV/namex-db-gcp/DATABASE_PASSWORD" -NAMEX_DATABASE_PORT="op://database/$APP_ENV/namex-db-gcp/DATABASE_PORT" -NAMEX_DATABASE_USERNAME="op://database/$APP_ENV/namex-db-gcp/DATABASE_USERNAME" +DATABASE_NAME="op://database/$APP_ENV/namex-db-gcp/DATABASE_NAME" +DATABASE_USERNAME="op://database/$APP_ENV/namex-db-gcp/DATABASE_USERNAME" +DATABASE_INSTANCE_CONNECTION_NAME="op://database/$APP_ENV/namex-db-gcp/DATABASE_INSTANCE_CONNECTION_NAME" +DATABASE_SCHEMA="op://database/$APP_ENV/namex-db-gcp/DATABASE_SCHEMA" APP_FILE="op://namex/$APP_ENV/notebook-report/APP_FILE" DAILY_REPORT_RECIPIENTS="op://namex/$APP_ENV/notebook-report/DAILY_REPORT_RECIPIENTS" WEEKLY_REPORT_NAMEX_RECIPIENTS="op://namex/$APP_ENV/notebook-report/WEEKLY_REPORT_NAMEX_RECIPIENTS" @@ -14,3 +13,4 @@ NOTIFY_API_VERSION="op://API/$APP_ENV/notify-api/NOTIFY_API_VERSION" KEYCLOAK_AUTH_TOKEN_URL="op://keycloak/$APP_ENV/base/KEYCLOAK_AUTH_TOKEN_URL" KEYCLOAK_CLIENT_ID="op://keycloak/$APP_ENV/entity-service-account/ENTITY_SERVICE_ACCOUNT_CLIENT_ID" KEYCLOAK_CLIENT_SECRET="op://keycloak/$APP_ENV/entity-service-account/ENTITY_SERVICE_ACCOUNT_CLIENT_SECRET" +VPC_CONNECTOR="op://CD/$APP_ENV/base/VPC_CONNECTOR" diff --git a/jobs/notebook-report/poetry.lock b/jobs/notebook-report/poetry.lock index 51a3d0c63..a485b8b35 100644 --- a/jobs/notebook-report/poetry.lock +++ b/jobs/notebook-report/poetry.lock @@ -1,12 +1,24 @@ -# This file is automatically @generated by Poetry and should not be changed by hand. +# This file is automatically @generated by Poetry 2.2.1 and should not be changed by hand. + +[[package]] +name = "aiofiles" +version = "25.1.0" +description = "File support for asyncio." +optional = false +python-versions = ">=3.9" +groups = ["main"] +files = [ + {file = "aiofiles-25.1.0-py3-none-any.whl", hash = "sha256:abe311e527c862958650f9438e859c1fa7568a141b22abcd015e120e86a85695"}, + {file = "aiofiles-25.1.0.tar.gz", hash = "sha256:a8d728f0a29de45dc521f18f07297428d56992a742f0cd2701ba86e44d23d5b2"}, +] [[package]] name = "aiohappyeyeballs" version = "2.5.0" description = "Happy Eyeballs for asyncio" -category = "main" optional = false python-versions = ">=3.9" +groups = ["main"] files = [ {file = "aiohappyeyeballs-2.5.0-py3-none-any.whl", hash = "sha256:0850b580748c7071db98bffff6d4c94028d0d3035acc20fd721a0ce7e8cac35d"}, {file = "aiohappyeyeballs-2.5.0.tar.gz", hash = "sha256:18fde6204a76deeabc97c48bdd01d5801cfda5d6b9c8bbeb1aaaee9d648ca191"}, @@ 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and client libraries" -category = "main" optional = false python-versions = ">=3.8" +groups = ["main"] files = [ {file = "jupyter_client-8.6.3-py3-none-any.whl", hash = "sha256:e8a19cc986cc45905ac3362915f410f3af85424b4c0905e94fa5f2cb08e8f23f"}, {file = "jupyter_client-8.6.3.tar.gz", hash = "sha256:35b3a0947c4a6e9d589eb97d7d4cd5e90f910ee73101611f01283732bd6d9419"}, ] [package.dependencies] -jupyter-core = ">=4.12,<5.0.0 || >=5.1.0" +jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0" python-dateutil = ">=2.8.2" pyzmq = ">=23.0" tornado = ">=6.2" @@ -1458,15 +1715,15 @@ traitlets = ">=5.3" [package.extras] docs = ["ipykernel", "myst-parser", "pydata-sphinx-theme", "sphinx (>=4)", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"] -test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"] +test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko ; sys_platform == \"win32\"", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"] [[package]] name = "jupyter-core" version = "5.7.2" description = "Jupyter core package. 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"sha256:9ed0579d3502c94b4b3732ac120375cda96f923114522847de4b3bb98b96b6b7"}, @@ -3616,9 +3909,9 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0, name = "types-python-dateutil" version = "2.9.0.20241206" description = "Typing stubs for python-dateutil" -category = "main" optional = false python-versions = ">=3.8" +groups = ["main"] files = [ {file = "types_python_dateutil-2.9.0.20241206-py3-none-any.whl", hash = "sha256:e248a4bc70a486d3e3ec84d0dc30eec3a5f979d6e7ee4123ae043eedbb987f53"}, {file = "types_python_dateutil-2.9.0.20241206.tar.gz", hash = "sha256:18f493414c26ffba692a72369fea7a154c502646301ebfe3d56a04b3767284cb"}, @@ -3628,21 +3921,33 @@ files = [ name = "typing-extensions" version = "4.12.2" description = "Backported and Experimental Type Hints for Python 3.8+" -category = "main" optional = false python-versions = ">=3.8" +groups = ["main"] files = [ {file = "typing_extensions-4.12.2-py3-none-any.whl", hash = "sha256:04e5ca0351e0f3f85c6853954072df659d0d13fac324d0072316b67d7794700d"}, {file = "typing_extensions-4.12.2.tar.gz", hash = "sha256:1a7ead55c7e559dd4dee8856e3a88b41225abfe1ce8df57b7c13915fe121ffb8"}, ] +[[package]] +name = "tzdata" +version = "2025.2" +description = "Provider of IANA time zone data" +optional = false +python-versions = ">=2" +groups = ["main"] +files = [ + {file = "tzdata-2025.2-py2.py3-none-any.whl", hash = "sha256:1a403fada01ff9221ca8044d701868fa132215d84beb92242d9acd2147f667a8"}, + {file = "tzdata-2025.2.tar.gz", hash = "sha256:b60a638fcc0daffadf82fe0f57e53d06bdec2f36c4df66280ae79bce6bd6f2b9"}, +] + [[package]] name = "uri-template" version = "1.3.0" description = "RFC 6570 URI Template Processor" -category = "main" optional = false python-versions = ">=3.7" +groups = ["main"] files = [ {file = "uri-template-1.3.0.tar.gz", hash = "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7"}, {file = "uri_template-1.3.0-py3-none-any.whl", hash = "sha256:a44a133ea12d44a0c0f06d7d42a52d71282e77e2f937d8abd5655b8d56fc1363"}, @@ -3655,16 +3960,16 @@ dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake name = "urllib3" version = "2.3.0" description = "HTTP library with thread-safe connection pooling, file post, and more." -category = "main" optional = false python-versions = ">=3.9" +groups = ["main"] files = [ {file = "urllib3-2.3.0-py3-none-any.whl", hash = "sha256:1cee9ad369867bfdbbb48b7dd50374c0967a0bb7710050facf0dd6911440e3df"}, {file = "urllib3-2.3.0.tar.gz", hash = "sha256:f8c5449b3cf0861679ce7e0503c7b44b5ec981bec0d1d3795a07f1ba96f0204d"}, ] [package.extras] -brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)"] +brotli = ["brotli (>=1.0.9) ; platform_python_implementation == \"CPython\"", "brotlicffi (>=0.8.0) ; platform_python_implementation != \"CPython\""] h2 = ["h2 (>=4,<5)"] socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"] zstd = ["zstandard (>=0.18.0)"] @@ -3673,9 +3978,9 @@ zstd = ["zstandard (>=0.18.0)"] name = "wcwidth" version = "0.2.13" description = "Measures the displayed width of unicode strings in a terminal" -category = "main" optional = false python-versions = "*" +groups = ["main"] files = [ {file = "wcwidth-0.2.13-py2.py3-none-any.whl", hash = "sha256:3da69048e4540d84af32131829ff948f1e022c1c6bdb8d6102117aac784f6859"}, {file = "wcwidth-0.2.13.tar.gz", hash = "sha256:72ea0c06399eb286d978fdedb6923a9eb47e1c486ce63e9b4e64fc18303972b5"}, @@ -3685,9 +3990,9 @@ files = [ name = "webcolors" version = "24.11.1" description = "A library for working with the color formats defined by HTML and CSS." -category = "main" optional = false python-versions = ">=3.9" +groups = ["main"] files = [ {file = "webcolors-24.11.1-py3-none-any.whl", hash = "sha256:515291393b4cdf0eb19c155749a096f779f7d909f7cceea072791cb9095b92e9"}, {file = "webcolors-24.11.1.tar.gz", hash = "sha256:ecb3d768f32202af770477b8b65f318fa4f566c22948673a977b00d589dd80f6"}, @@ -3697,9 +4002,9 @@ files = [ name = "webencodings" version = "0.5.1" description = "Character encoding aliases for legacy web content" -category = "main" optional = false python-versions = "*" +groups = ["main"] files = [ {file = "webencodings-0.5.1-py2.py3-none-any.whl", hash = "sha256:a0af1213f3c2226497a97e2b3aa01a7e4bee4f403f95be16fc9acd2947514a78"}, {file = "webencodings-0.5.1.tar.gz", hash = "sha256:b36a1c245f2d304965eb4e0a82848379241dc04b865afcc4aab16748587e1923"}, @@ -3709,9 +4014,9 @@ files = [ name = "websocket-client" version = "1.8.0" description = "WebSocket client for Python with low level API options" -category = "main" optional = false python-versions = ">=3.8" +groups = ["main"] files = [ {file = "websocket_client-1.8.0-py3-none-any.whl", hash = "sha256:17b44cc997f5c498e809b22cdf2d9c7a9e71c02c8cc2b6c56e7c2d1239bfa526"}, {file = "websocket_client-1.8.0.tar.gz", hash = "sha256:3239df9f44da632f96012472805d40a23281a991027ce11d2f45a6f24ac4c3da"}, @@ -3726,9 +4031,9 @@ test = ["websockets"] name = "werkzeug" version = "3.1.3" description = "The comprehensive WSGI web application library." -category = "main" optional = false python-versions = ">=3.9" +groups = ["main"] files = [ {file = "werkzeug-3.1.3-py3-none-any.whl", hash = "sha256:54b78bf3716d19a65be4fceccc0d1d7b89e608834989dfae50ea87564639213e"}, {file = "werkzeug-3.1.3.tar.gz", hash = "sha256:60723ce945c19328679790e3282cc758aa4a6040e4bb330f53d30fa546d44746"}, @@ -3744,9 +4049,9 @@ watchdog = ["watchdog (>=2.3)"] name = "yarl" version = "1.18.3" description = "Yet another URL library" -category = "main" optional = false python-versions = ">=3.9" +groups = ["main"] files = [ {file = "yarl-1.18.3-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:7df647e8edd71f000a5208fe6ff8c382a1de8edfbccdbbfe649d263de07d8c34"}, {file = "yarl-1.18.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:c69697d3adff5aa4f874b19c0e4ed65180ceed6318ec856ebc423aa5850d84f7"}, @@ -3838,6 +4143,6 @@ multidict = ">=4.0" propcache = ">=0.2.0" [metadata] -lock-version = "2.0" -python-versions = "^3.12" -content-hash = "c4f8da2bdf73ea35d8e198163a55dabe4bc2db62eb131b8a0f78110588c9d47c" +lock-version = "2.1" +python-versions = ">=3.12,<3.13" +content-hash = "a557197aca2c0fa14bdcc7bb6626667dfd96edd3b13384fd7ccf1c850b98d299" diff --git a/jobs/notebook-report/pyproject.toml b/jobs/notebook-report/pyproject.toml index 91be1ba01..f1460bf16 100644 --- a/jobs/notebook-report/pyproject.toml +++ b/jobs/notebook-report/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "notebook-report" -version = "0.1.0" +version = "0.2.0" description = "An app to detect and notify about bad designations." authors = ["Steven Chen "] license = "Apache-2.0" @@ -10,20 +10,18 @@ packages = [ ] [tool.poetry.dependencies] -python = "^3.12" +python = ">=3.12,<3.13" structured_logging = { git = "https://github.com/bcgov/sbc-connect-common.git", subdirectory = "python/structured-logging" } +cloud-sql-connector = { git = "https://github.com/bcgov/sbc-connect-common.git", subdirectory = "python/cloud-sql-connector", branch = "main" } flask = "^3.0.2" -sqlalchemy = "^1.4.18" -psycopg2-binary = "^2.9.7" secure-smtplib = "^0.1.1" pytz = "^2022.4" python-dotenv = "0.21.0" requests = "^2.31.0" -pg8000 = "^1.31.2" papermill = "^2.3.3" ipython-sql = "^0.4.0" ipykernel = "^6.25.2" -pandas = "^1.5.3" +pandas = ">=2.0,<3.0" notebook = "^7.0.4" jupyter_client = "^8.3.1" jupyterlab_server = "^2.25.0" diff --git a/jobs/notebook-report/run.sh b/jobs/notebook-report/run.sh index 0c1491bc5..adf7c923b 100755 --- a/jobs/notebook-report/run.sh +++ b/jobs/notebook-report/run.sh @@ -1,4 +1,4 @@ #! /bin/bash cd src echo 'run notebookreport to generate Jupyter Notebook Report' -python notebookreport.py +python3.12 notebookreport.py diff --git a/jobs/notebook-report/src/config.py b/jobs/notebook-report/src/config.py index 3e8933637..bf9c8ef0a 100644 --- a/jobs/notebook-report/src/config.py +++ b/jobs/notebook-report/src/config.py @@ -1,20 +1,26 @@ import os -from dotenv import load_dotenv, find_dotenv + +from dotenv import find_dotenv, load_dotenv # this will load all the envars from a .env file located in the project root (api) load_dotenv(find_dotenv()) class Config(object): - _DB_USER = os.getenv("NAMEX_DATABASE_USERNAME", "") - _DB_PASSWORD = os.getenv("NAMEX_DATABASE_PASSWORD", "") - _DB_NAME = os.getenv("NAMEX_DATABASE_NAME", "") - _DB_HOST = os.getenv("NAMEX_DATABASE_HOST", "") - _DB_PORT = os.getenv("NAMEX_DATABASE_PORT", "5432") - if DB_UNIX_SOCKET := os.getenv('NAMEX_DATABASE_UNIX_SOCKET', None): - NAMEX_DATABASE_URI = f'postgresql+psycopg2://{_DB_USER}:{_DB_PASSWORD}@/{_DB_NAME}?host={DB_UNIX_SOCKET}' + DATABASE_USERNAME = os.getenv('DATABASE_USERNAME', 'postgres') + DATABASE_PASSWORD = os.getenv('DATABASE_PASSWORD', 'postgres') + DATABASE_NAME = os.getenv('DATABASE_NAME', 'unittesting') + DATABASE_HOST = os.getenv('DATABASE_HOST', 'localhost') + DATABASE_PORT = os.getenv('DATABASE_PORT', '5432') + + DATABASE_SCHEMA = os.getenv('DATABASE_SCHEMA', 'public') + DATABASE_IP_TYPE = os.getenv('DATABASE_IP_TYPE', 'private') + DATABASE_OWNER = os.getenv('DATABASE_OWNER', 'postgres') + + if DATABASE_INSTANCE_CONNECTION_NAME := os.getenv('DATABASE_INSTANCE_CONNECTION_NAME', None): + SQLALCHEMY_DATABASE_URI = 'postgresql+pg8000://' else: - NAMEX_DATABASE_URI = f'postgresql://{_DB_USER}:{_DB_PASSWORD}@{_DB_HOST}:{int(_DB_PORT)}/{_DB_NAME}' + SQLALCHEMY_DATABASE_URI = f'postgresql+pg8000://{DATABASE_USERNAME}:{DATABASE_PASSWORD}@{DATABASE_HOST}:{DATABASE_PORT}/{DATABASE_NAME}' PROJECT_ROOT = os.path.abspath(os.path.dirname(__file__)) APP_FILE = os.getenv('APP_FILE', '') diff --git a/jobs/notebook-report/src/daily/daily.ipynb b/jobs/notebook-report/src/daily/daily.ipynb index a154a0c11..6e54309f1 100644 --- a/jobs/notebook-report/src/daily/daily.ipynb +++ b/jobs/notebook-report/src/daily/daily.ipynb @@ -30,12 +30,13 @@ }, "outputs": [], "source": [ + "import os\n", "import csv\n", + "import pandas as pd\n", "from datetime import datetime, timedelta\n", - "from config import Config\n", - "\n", - "%load_ext sql\n", - "%config SqlMagic.displaylimit = 5" + "from cloud_sql_connector import DBConfig, getconn\n", + "import pg8000\n", + "import sqlalchemy" ] }, { @@ -59,7 +60,35 @@ }, "outputs": [], "source": [ - "%sql $Config.NAMEX_DATABASE_URI" + "config = DBConfig(\n", + " instance_name=os.getenv('DATABASE_INSTANCE_CONNECTION_NAME'),\n", + " database=os.getenv('DATABASE_NAME'),\n", + " user=os.getenv('DATABASE_USERNAME'),\n", + " ip_type=\"public\",\n", + " schema=os.getenv('DATABASE_SCHEMA')\n", + ")\n", + "\n", + "def get_conn():\n", + " \"\"\"Create Cloud SQL connection using bcgov cloud-sql-connector.\"\"\"\n", + " return getconn(config)\n", + "\n", + "# Create SQLAlchemy engine\n", + "engine = sqlalchemy.create_engine(\n", + " \"postgresql+pg8000://\",\n", + " creator=get_conn\n", + ")\n", + "\n", + "print(\"Cloud SQL engine created.\")\n", + "print(f\"Engine: {engine}\")\n", + "\n", + "# Test connection\n", + "try:\n", + " with engine.connect() as connection:\n", + " result = connection.execute(sqlalchemy.text(\"SELECT 1 as test\"))\n", + " print(\"✅ Database connection successful!\")\n", + " print(result.fetchone())\n", + "except Exception as e:\n", + " print(f\"❌ Connection failed: {e}\")" ] }, { @@ -77,9 +106,19 @@ "metadata": {}, "outputs": [], "source": [ - "%%sql stat_daily_submitted <<\n", - "SELECT count(r.*) AS \"Number of Names Submitted:\" FROM requests r\n", - "WHERE date(r.submitted_date at time zone 'utc' at time zone 'pst') = date(current_date - 1)" + "from pathlib import Path\n", + "from datetime import datetime, timedelta\n", + "\n", + "# Always use notebook folder as base\n", + "notebook_dir = Path(\".\") # papermill cwd will set this\n", + "\n", + "# Output directory (same as notebook folder, no extra 'daily')\n", + "output_dir = notebook_dir\n", + "output_dir.mkdir(exist_ok=True)\n", + "\n", + "datestr = (datetime.now() - timedelta(1)).strftime('%Y-%m-%d')\n", + "filename = output_dir / f\"daily_totals_{datestr}.csv\"\n", + "print(\"CSV will be saved to:\", filename)\n" ] }, { @@ -88,17 +127,18 @@ "metadata": {}, "outputs": [], "source": [ - "filename ='daily_totals_' + datetime.strftime(datetime.now()-timedelta(1), '%Y-%m-%d') +'.csv'\n", - "\n", - "edt = stat_daily_submitted.DataFrame()\n", + "query_submitted = \"\"\"\n", + "SELECT count(r.*) AS number_of_names_submitted\n", + "FROM requests r\n", + "WHERE date(r.submitted_date at time zone 'utc' at time zone 'pst') = date(current_date - 1)\n", + "\"\"\"\n", + "df_submitted = pd.read_sql(query_submitted, engine)\n", "\n", - "with open(filename, 'w') as f:\n", - " edt.to_csv(f, sep=',', encoding='utf-8', index=False)\n", - "\n", - "if edt.empty:\n", - " with open(filename, 'a') as f:\n", - " writer = csv.writer(f)\n", - " writer.writerow(('No Data Retrieved',''))" + "with open(filename, 'w', newline='', encoding='utf-8') as f:\n", + " if df_submitted.empty:\n", + " f.write('No Data Retrieved for Daily Submitted\\n')\n", + " else:\n", + " df_submitted.to_csv(f, index=False)" ] }, { @@ -113,25 +153,26 @@ }, "outputs": [], "source": [ - "%%sql stat_daily_completed <<\n", - "WITH Detail AS \n", - "(\n", - " SELECT to_char(date(current_date -1), 'YYYY-Mon-DD') AS EXAMINED_DATE\n", - " , (SELECT username from users u where u.id=e.user_id) AS EXAMINER \n", - " , count(e.*) + count(r.*) FILTER (WHERE r.priority_cd = 'Y') AS TOTAL \n", + "query_completed = \"\"\"\n", + "WITH Detail AS (\n", + " SELECT\n", + " to_char(date(current_date -1), 'YYYY-Mon-DD') AS examined_date,\n", + " (SELECT username FROM users u WHERE u.id=e.user_id) AS examiner,\n", + " count(e.*) + count(r.*) FILTER (WHERE r.priority_cd = 'Y') AS total\n", " FROM events e,\n", - " requests r\n", + " requests r\n", " WHERE e.user_id != 1\n", - " AND r.id = e.nr_id\n", - " AND date(e.event_dt at time zone 'utc' at time zone 'pst') = date(current_date - 1)\n", - " AND e.state_cd in ('APPROVED','REJECTED','CONDITIONAL','CANCELLED')\n", - " GROUP BY e.user_id \n", + " AND r.id = e.nr_id\n", + " AND date(e.event_dt at time zone 'utc' at time zone 'pst') = date(current_date - 1)\n", + " AND e.state_cd IN ('APPROVED','REJECTED','CONDITIONAL','CANCELLED')\n", + " GROUP BY e.user_id\n", " ORDER BY total DESC\n", ")\n", - "\n", - "SELECT * FROM Detail WHERE examiner LIKE '%idir%' \n", + "SELECT * FROM Detail WHERE examiner LIKE '%idir%'\n", "UNION ALL\n", - "SELECT null, 'SUM' EXAMINER, sum(TOTAL) AS TOTAL FROM Detail WHERE examiner LIKE '%idir%'" + "SELECT null, 'SUM' AS examiner, sum(total) AS total\n", + "FROM Detail WHERE examiner LIKE '%idir%'\n", + "\"\"\"" ] }, { @@ -146,10 +187,10 @@ }, "outputs": [], "source": [ - "edt = stat_daily_completed.DataFrame()\n", + "df_completed = pd.read_sql(query_completed, engine)\n", "\n", - "if not edt.empty: \n", - " edt['examiner'] = edt['examiner'].str.replace('idir/','')" + "if not df_completed.empty:\n", + " df_completed['examiner'] = df_completed['examiner'].str.replace('idir/', '', regex=False)" ] }, { @@ -174,21 +215,19 @@ }, "outputs": [], "source": [ - "with open(filename, 'a') as f: \n", - " f.write('\\n\\n Number of Names Processed:\\n')\n", - " edt.to_csv(f, sep=',', encoding='utf-8', index=False) \n", - "\n", - "if edt.empty:\n", - " with open(filename, 'a') as f:\n", - " writer = csv.writer(f)\n", - " writer.writerow(('No Data Retrieved',''))" + "with open(filename, 'a', newline='', encoding='utf-8') as f:\n", + " f.write('\\n\\nNumber of Names Processed:\\n')\n", + " if df_completed.empty:\n", + " f.write('No Data Retrieved for Daily Completed\\n')\n", + " else:\n", + " df_completed.to_csv(f, index=False)" ] } ], "metadata": { "celltoolbar": "Tags", "kernelspec": { - "display_name": "Python 3", + "display_name": "3.8.18", "language": "python", "name": "python3" }, @@ -202,7 +241,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.7.3" + "version": "3.8.18" }, "pycharm": { "stem_cell": { diff --git a/jobs/notebook-report/src/notebookreport.py b/jobs/notebook-report/src/notebookreport.py index 858dacf61..e13655a83 100644 --- a/jobs/notebook-report/src/notebookreport.py +++ b/jobs/notebook-report/src/notebookreport.py @@ -1,18 +1,18 @@ """s2i based launch script to run the notebook.""" import ast +import base64 import fnmatch +import logging import os import sys import traceback -import requests -import base64 -import logging from datetime import datetime, timedelta from pathlib import Path -from structured_logging import StructuredLogging import papermill as pm +import requests from flask import Flask, current_app +from structured_logging import StructuredLogging from config import Config @@ -76,19 +76,20 @@ def processnotebooks(notebookdirectory, token): # Only run weekly report on Monday (index is 0) for previous 7 days data if (notebookdirectory == 'daily' or (notebookdirectory == 'weekly' and datetime.now().weekday() in weekreportday)): current_app.logger.info('Processing: %s', notebookdirectory) - for file in findfiles(notebookdirectory, '*.ipynb'): nbfile = os.path.basename(file).split('.ipynb')[0] if nbfile == 'daily': subject = 'Daily NameX Stats for ' + date + ext - filename = 'daily_totals_' + date + '.csv' + # filename = 'daily_totals_' + date + '.csv' + filename = os.path.join(notebookdirectory, f'daily_totals_{date}.csv') recipients = Config.DAILY_REPORT_RECIPIENTS elif nbfile == 'weeklynamex': subject = 'Weekly NameX Stats till ' + date + ext - filename = 'weekly_totals_till_' + datetime.strftime(datetime.now()-timedelta(1), '%Y-%m-%d') + '.csv' + # filename = 'weekly_totals_till_' + datetime.strftime(datetime.now()-timedelta(1), '%Y-%m-%d') + '.csv' + filename = os.path.join(notebookdirectory, f'weekly_totals_till_{date}.csv') recipients = Config.WEEKLY_REPORT_NAMEX_RECIPIENTS - + email = { 'recipients': recipients, 'content': { @@ -100,7 +101,13 @@ def processnotebooks(notebookdirectory, token): try: temp_file = 'temp.ipynb' - pm.execute_notebook(file, temp_file, parameters=None) + # pm.execute_notebook(file, temp_file, parameters=None) + pm.execute_notebook( + input_path=file, + output_path=temp_file, + parameters=None, + cwd=os.path.dirname(file), # crucial! + ) with open(filename, "rb") as f: attachments = [] diff --git a/jobs/notebook-report/src/weekly/weeklynamex.ipynb b/jobs/notebook-report/src/weekly/weeklynamex.ipynb index acb86ffce..99a14f8db 100644 --- a/jobs/notebook-report/src/weekly/weeklynamex.ipynb +++ b/jobs/notebook-report/src/weekly/weeklynamex.ipynb @@ -30,8 +30,11 @@ }, "outputs": [], "source": [ + "import os\n", + "import pandas as pd\n", "from datetime import datetime, timedelta\n", - "from config import Config\n", + "from cloud_sql_connector import DBConfig, getconn\n", + "import sqlalchemy\n", "\n", "%load_ext sql\n", "%config SqlMagic.displaylimit = 5" @@ -59,8 +62,32 @@ }, "outputs": [], "source": [ + "# Database connection setup\n", + "config = DBConfig(\n", + " instance_name=os.getenv('DATABASE_INSTANCE_CONNECTION_NAME'),\n", + " database=os.getenv('DATABASE_NAME'),\n", + " user=os.getenv('DATABASE_USERNAME'),\n", + " ip_type=\"public\",\n", + " schema=os.getenv('DATABASE_SCHEMA')\n", + ")\n", + "\n", + "def get_conn():\n", + " return getconn(config)\n", + "\n", + "engine = sqlalchemy.create_engine(\n", + " \"postgresql+pg8000://\",\n", + " creator=get_conn\n", + ")\n", "\n", - "%sql $Config.NAMEX_DATABASE_URI" + "print(\"Cloud SQL engine created:\", engine)\n", + "\n", + "# Test connection\n", + "try:\n", + " with engine.connect() as conn:\n", + " result = conn.execute(sqlalchemy.text(\"SELECT 1 AS test\"))\n", + " print(\"✅ Connection test:\", result.fetchone())\n", + "except Exception as e:\n", + " print(\"❌ Connection failed:\", e)" ] }, { @@ -85,10 +112,31 @@ }, "outputs": [], "source": [ - "%%sql stat_weekly_submitted <<\n", - "SELECT count(r.*) AS \"Number of Names Submitted:\" FROM requests r\n", - "WHERE date(r.submitted_date at time zone 'utc' at time zone 'pst') > date(current_date - 1 - interval '1 weeks')\n", - " AND date(r.submitted_date at time zone 'utc' at time zone 'pst') <= date(current_date - 1)" + "from pathlib import Path\n", + "from datetime import datetime, timedelta\n", + "\n", + "# Always use notebook folder as base\n", + "notebook_dir = Path(\".\") # papermill cwd will set this\n", + "\n", + "# Output directory (same as notebook folder, no extra 'daily')\n", + "output_dir = notebook_dir\n", + "output_dir.mkdir(exist_ok=True)\n", + "\n", + "datestr = (datetime.now() - timedelta(1)).strftime('%Y-%m-%d')\n", + "filename = output_dir / f\"weekly_totals_till_{datestr}.csv\"\n", + "print(\"CSV will be saved to:\", filename)\n", + "\n", + "\n", + "# %%\n", + "# Weekly submitted query\n", + "weekly_submitted_query = \"\"\"\n", + "SELECT count(r.*) AS number_of_names_submitted\n", + "FROM requests r\n", + "WHERE date(r.submitted_date at time zone 'utc' at time zone 'pst') \n", + " > date(current_date - 1 - interval '1 weeks')\n", + " AND date(r.submitted_date at time zone 'utc' at time zone 'pst') \n", + " <= date(current_date - 1)\n", + "\"\"\"\n" ] }, { @@ -97,10 +145,19 @@ "metadata": {}, "outputs": [], "source": [ - "filename = 'weekly_totals_till_' + datetime.strftime(datetime.now()-timedelta(1), '%Y-%m-%d') +'.csv'\n", + "try:\n", + " stat_weekly_submitted_df = pd.read_sql(weekly_submitted_query, engine)\n", + " display(stat_weekly_submitted_df.head())\n", + "except Exception as e:\n", + " print(\"Error running weekly submitted query:\", e)\n", + " stat_weekly_submitted_df = pd.DataFrame()\n", "\n", - "with open(filename, 'w') as f:\n", - " stat_weekly_submitted.DataFrame().to_csv(f, sep=',', encoding='utf-8', index=False)" + "# Save submitted section to CSV\n", + "with open(filename, 'w', newline='', encoding='utf-8') as f:\n", + " if stat_weekly_submitted_df.empty:\n", + " f.write('No Data Retrieved for Weekly Submitted\\n')\n", + " else:\n", + " stat_weekly_submitted_df.to_csv(f, sep=',', index=False)\n" ] }, { @@ -109,39 +166,40 @@ "metadata": {}, "outputs": [], "source": [ - "\n", - "%%sql stat_weekly_completed <<\n", + "weekly_completed_query = \"\"\"\n", "WITH Detail AS \n", "(\n", - " SELECT e.user_id \n", - " , (SELECT username FROM users u WHERE u.id=e.user_id) AS EXAMINER\n", - " , count(e.*) FILTER (WHERE e.state_cd = 'APPROVED') AS APPROVED\n", - " , count(e.*) FILTER (WHERE e.state_cd = 'REJECTED') AS REJECTED\n", - " , count(e.*) FILTER (WHERE e.state_cd = 'CONDITIONAL') AS CONDITIONAL\n", - " , count(e.*) FILTER (WHERE e.state_cd = 'CANCELLED') AS CANCELLED\n", - " , count(r.*) FILTER (WHERE r.priority_cd = 'Y') AS PRIORITIES\n", - " , count(e.*) + count(r.*) FILTER (WHERE r.priority_cd = 'Y') AS TOTAL \n", + " SELECT e.user_id,\n", + " (SELECT username FROM users u WHERE u.id=e.user_id) AS examiner,\n", + " count(e.*) FILTER (WHERE e.state_cd = 'APPROVED') AS approved,\n", + " count(e.*) FILTER (WHERE e.state_cd = 'REJECTED') AS rejected,\n", + " count(e.*) FILTER (WHERE e.state_cd = 'CONDITIONAL') AS conditional,\n", + " count(e.*) FILTER (WHERE e.state_cd = 'CANCELLED') AS cancelled,\n", + " count(r.*) FILTER (WHERE r.priority_cd = 'Y') AS priorities,\n", + " count(e.*) + count(r.*) FILTER (WHERE r.priority_cd = 'Y') AS total\n", " FROM events e,\n", - " requests r\n", + " requests r\n", " WHERE e.user_id != 1\n", - " AND r.id = e.nr_id\n", - " AND date(e.event_dt at time zone 'utc' at time zone 'pst') > date(current_date - 1 - interval '1 weeks')\n", - " AND date(e.event_dt at time zone 'utc' at time zone 'pst') <= date(current_date - 1)\n", - " AND e.state_cd in ('APPROVED','REJECTED','CONDITIONAL','CANCELLED')\n", + " AND r.id = e.nr_id\n", + " AND date(e.event_dt at time zone 'utc' at time zone 'pst') \n", + " > date(current_date - 1 - interval '1 weeks')\n", + " AND date(e.event_dt at time zone 'utc' at time zone 'pst') \n", + " <= date(current_date - 1)\n", + " AND e.state_cd IN ('APPROVED','REJECTED','CONDITIONAL','CANCELLED')\n", " GROUP BY e.user_id\n", ")\n", - "\n", - "SELECT * from Detail WHERE examiner LIKE '%idir%'\n", - "UNION all\n", - "SELECT null \n", - " , 'SUM' EXAMINER\n", - " , sum(APPROVED) AS APPROVED\n", - " , sum(REJECTED) AS REJECTED\n", - " , sum(CONDITIONAL) AS CONDITIONAL\n", - " , sum(CANCELLED) AS CANCELLED\n", - " , sum(PRIORITIES) AS PRIORITIES\n", - " , sum(TOTAL) AS TOTAL\n", - "FROM Detail WHERE examiner LIKE '%idir%';" + "SELECT * FROM Detail WHERE examiner LIKE '%idir%'\n", + "UNION ALL\n", + "SELECT null,\n", + " 'SUM' AS examiner,\n", + " sum(approved) AS approved,\n", + " sum(rejected) AS rejected,\n", + " sum(conditional) AS conditional,\n", + " sum(cancelled) AS cancelled,\n", + " sum(priorities) AS priorities,\n", + " sum(total) AS total\n", + "FROM Detail WHERE examiner LIKE '%idir%';\n", + "\"\"\"" ] }, { @@ -156,8 +214,11 @@ }, "outputs": [], "source": [ - "edt = stat_weekly_completed.DataFrame()\n", - "edt['examiner'] = edt['examiner'].str.replace('idir/','')" + "try:\n", + " stat_weekly_completed_df = pd.read_sql(weekly_completed_query, engine)\n", + "except Exception as e:\n", + " print(\"Error running weekly completed query:\", e)\n", + " stat_weekly_completed_df = pd.DataFrame()" ] }, { @@ -172,8 +233,14 @@ }, "outputs": [], "source": [ - "edt['approved+conditional_%'] = round(((edt.approved + edt.conditional) / edt.total).astype('float') * float(100), 2)\n", - "edt['rejected_%'] = round((edt.rejected / edt.total).astype('float') * float(100), 2)" + "if not stat_weekly_completed_df.empty:\n", + " stat_weekly_completed_df['examiner'] = stat_weekly_completed_df['examiner'].astype(str).str.replace('idir/', '', regex=False)\n", + " stat_weekly_completed_df['approved+conditional_%'] = round(\n", + " ((stat_weekly_completed_df['approved'] + stat_weekly_completed_df['conditional']) / stat_weekly_completed_df['total']) * 100, 2\n", + " )\n", + " stat_weekly_completed_df['rejected_%'] = round(\n", + " (stat_weekly_completed_df['rejected'] / stat_weekly_completed_df['total']) * 100, 2\n", + " )\n" ] }, { @@ -197,16 +264,24 @@ }, "outputs": [], "source": [ - "with open(filename, 'a') as f: \n", - " f.write('\\n\\n Number of Names Processed:\\n')\n", - " edt.to_csv(f, sep=',', encoding='utf-8', index=False) " + "with open(filename, 'a', newline='', encoding='utf-8') as f:\n", + " f.write('\\n\\nNumber of Names Processed:\\n')\n", + " if stat_weekly_completed_df.empty:\n", + " f.write('No Data Retrieved for Weekly Completed\\n')\n", + " else:\n", + " stat_weekly_completed_df.to_csv(f, sep=',', index=False)\n", + "\n", + "# %%\n", + "# Verification\n", + "print(\"CSV saved at:\", filename)\n", + "print(\"Exists:\", os.path.exists(filename), \"Size (bytes):\", os.path.getsize(filename) if os.path.exists(filename) else \"N/A\")\n" ] } ], "metadata": { "celltoolbar": "Tags", "kernelspec": { - "display_name": "Python 3", + "display_name": "3.8.18", "language": "python", "name": "python3" }, @@ -220,7 +295,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.7.3-final" + "version": "3.8.18" }, "pycharm": { "stem_cell": {