Describe the solution you'd like
In ForteHealth, we incorporate ScispaCy for bio ner annotation, I think, as the very first example, we can simply create a pipeline for bio NER annotation. The demo from scispacy is here
In scispacy, with model en_ner_bc5cdr_md, we can annotate Disease and Chemical, with model en_ner_bionlp13cg_md, we can annotate Cancer, Organ, etc. We can also show this by using different configuration to build the pipeline.
Possible included componets:
- Sentence Segementor
- Tokenizer
- Bio NER Tagger
Describe the solution you'd like
In ForteHealth, we incorporate ScispaCy for bio ner annotation, I think, as the very first example, we can simply create a pipeline for bio NER annotation. The demo from scispacy is here
In scispacy, with model en_ner_bc5cdr_md, we can annotate Disease and Chemical, with model en_ner_bionlp13cg_md, we can annotate Cancer, Organ, etc. We can also show this by using different configuration to build the pipeline.
Possible included componets: