patchworkplot/Dockerfile at main · Picotainers/patchworkplot · GitHub

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FROM python:3.11-slim-bookworm AS builder

ENV DEBIAN_FRONTEND=noninteractive \
    PIP_NO_CACHE_DIR=1 \
    PYTHONDONTWRITEBYTECODE=1 \
    PYTHONUNBUFFERED=1 \
    VIRTUAL_ENV=/opt/venv \
    PATH=/opt/venv/bin:$PATH

RUN apt-get update \
    && apt-get install -y --no-install-recommends ca-certificates gcc \
    && rm -rf /var/lib/apt/lists/*

RUN python -m venv "$VIRTUAL_ENV" \
    && pip install --upgrade pip \
    && pip install patchworkplot==1.0.0

FROM python:3.11-slim-bookworm

ENV DEBIAN_FRONTEND=noninteractive \
    PYTHONDONTWRITEBYTECODE=1 \
    PYTHONUNBUFFERED=1 \
    VIRTUAL_ENV=/opt/venv \
    PATH=/opt/venv/bin:$PATH

RUN apt-get update \
    && apt-get install -y --no-install-recommends ca-certificates minimap2 \
    && rm -rf /var/lib/apt/lists/*

COPY --from=builder /opt/venv /opt/venv

ENTRYPOINT ["patchworkplot"]
CMD ["--help"]