Clean up build ignores #18
Workflow file for this run
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| name: bioc-check | |
| on: | |
| push: | |
| branches: ["**"] | |
| pull_request: | |
| jobs: | |
| check: | |
| runs-on: ubuntu-latest | |
| env: | |
| _R_CHECK_FORCE_SUGGESTS_: false | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| - name: Configure pak worker count | |
| run: | | |
| echo 'options(Ncpus = 2L)' >> ~/.Rprofile | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| pak-version: devel | |
| working-directory: . | |
| dependencies: '"hard"' | |
| extra-packages: | | |
| bioc::BiocCheck | |
| bioc::BiocStyle | |
| any::CALIBERrfimpute | |
| any::knitr | |
| any::mice | |
| any::rmarkdown | |
| any::testthat | |
| any::BiocManager | |
| any::rcmdcheck | |
| - name: R CMD check | |
| uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| working-directory: . | |
| args: 'c("--as-cran", "--no-manual")' | |
| - name: BiocCheck | |
| working-directory: . | |
| run: | | |
| Rscript -e "BiocCheck::BiocCheck('.')" |