Continuous Integration #140

	name: Continuous Integration

	on:
	schedule:
	- cron: "0 9 * * *" # daily at 09Z
	push:
	branches: [main]
	pull_request:
	branches: [main]

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	tests:
	name: ${{ matrix.os }}-py${{ matrix.python-version }}
	if: github.repository == 'ARM-DOE/Adapt'
	runs-on: ${{ matrix.os }}-latest
	defaults:
	run:
	shell: bash -l {0}

	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.12", "3.13"]
	os: [ubuntu, macOS]

	steps:
	- name: Checkout repository
	uses: actions/checkout@v6
	with:
	fetch-depth: 0 # required for setuptools_scm version tag detection

	- name: Set up micromamba
	uses: mamba-org/setup-micromamba@v3
	with:
	environment-file: environment.yml
	create-args: python=${{ matrix.python-version }}
	init-shell: bash
	cache-downloads: true
	post-cleanup: "all"

	- name: Fetch all history for all tags and branches
	run: \|
	git fetch --prune

	- name: Install adapt
	run: pip install -e . --no-deps --force-reinstall

	- name: Install ruff
	run: pip install ruff

	- name: Install import-linter
	run: pip install import-linter

	- name: Show environment info
	run: \|
	python --version
	pip list \| head -n 30

	- name: Lint with ruff
	run: ruff check src tests

	- name: Check import architecture
	run: lint-imports --no-cache
	- name: Run tests
	run: \|
	pytest -m "not integration" \
	--cov=src/adapt \
	--cov-report=term \
	--cov-report=xml

	- name: Upload coverage to Codecov
	uses: codecov/codecov-action@v6
	with:
	token: ${{ secrets.CODECOV_TOKEN }}
	files: coverage.xml
	flags: unittests
	fail_ci_if_error: false

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