fixed CVEs in jettison by repacing it

Author: sfranke43

org-tweetyproject-arg-bipolar/src/main/java/org/tweetyproject/arg/bipolar/analysis/ProbabilisticJustificationAnalysis.java

@@ -1,4 +1,27 @@
+/*
+ *  This file is part of "TweetyProject", a collection of Java libraries for
+ *  logical aspects of artificial intelligence and knowledge representation.
+ *
+ *  TweetyProject is free software: you can redistribute it and/or modify
+ *  it under the terms of the GNU Lesser General Public License version 3 as
+ *  published by the Free Software Foundation.
+ *
+ *  This program is distributed in the hope that it will be useful,
+ *  but WITHOUT ANY WARRANTY; without even the implied warranty of
+ *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ *  GNU Lesser General Public License for more details.
+ *
+ *  You should have received a copy of the GNU Lesser General Public License
+ *  along with this program. If not, see <http://www.gnu.org/licenses/>.
+ *
+ *  Copyright 2022 The TweetyProject Team <http://tweetyproject.org/contact/>
+ */
 package org.tweetyproject.arg.bipolar.analysis;
 
+/**
+ * probablisitic justification analysis
+ * @author Matthias Thimm
+ *
+ */
 public interface ProbabilisticJustificationAnalysis {
 }

org-tweetyproject-arg-dung/src/main/java/org/tweetyproject/arg/dung/examples/AFLearnerExample.java

@@ -33,6 +33,10 @@
  * @author Lars Bengel
  */
 public class AFLearnerExample {
+	/**
+	 * main method
+	 * @param args command line arguments
+	 */
     public static void main(String[] args ) {
 
         // create a hidden argumentation framework that we will try to learn

org-tweetyproject-logics-pl/src/main/java/org/tweetyproject/logics/pl/examples/A_sebi.java

@@ -0,0 +1,23 @@
+package org.tweetyproject.logics.pl.examples;
+
+import java.io.FileNotFoundException;
+import java.io.IOException;
+import org.tweetyproject.commons.ParserException;
+import org.tweetyproject.logics.pl.parser.PlParser;
+import org.tweetyproject.logics.pl.syntax.PlBeliefSet;
+import org.tweetyproject.logics.pl.syntax.PlFormula;
+import org.tweetyproject.logics.pl.syntax.Proposition;
+
+public class A_sebi {
+	public static void main(String[] args) throws FileNotFoundException, ParserException, IOException {
+		PlParser parser = new PlParser();
+		PlBeliefSet p = parser.parseBeliefBaseFromFile("C:\\Users\\Sebastian\\Desktop\\a.txt");
+		PlFormula f = p.getCanonicalOrdering().get(0);
+		Proposition a = f.getAtoms().iterator().next();
+		Proposition a1 = new Proposition("a");
+		System.out.println("formula: " + f.toString());
+		System.out.println("chosen from formula: " + a.toString());
+		System.out.println("occurence of " + a + "(chosen from formula): " + f.numberOfOccurrences(a));
+		System.out.println("occurence of " + a1 + "(newly created): " + f.numberOfOccurrences(a1));
+	}
+}

org-tweetyproject-web/pom.xml

@@ -77,6 +77,11 @@
     		<artifactId>delp</artifactId>
     		<version>1.23-SNAPSHOT</version>
 	    </dependency>
+		<dependency>
+		    <groupId>org.json</groupId>
+		    <artifactId>json</artifactId>
+		    <version>20220924</version>
+		</dependency>
     </dependencies>
 
 

org-tweetyproject-web/src/main/java/org/tweetyproject/util/JSONObject.java

@@ -0,0 +1,5 @@
+package org.tweetyproject.util;
+
+public class JSONObject {
+
+}

org-tweetyproject-web/src/main/java/org/tweetyproject/web/services/DelpService.java

@@ -25,6 +25,7 @@
 import javax.ws.rs.Path;
 import javax.ws.rs.Produces;
 import javax.ws.rs.core.MediaType;
+import org.json.*;
 
 import org.tweetyproject.arg.delp.parser.DelpParser;
 import org.tweetyproject.arg.delp.reasoner.DelpReasoner;
@@ -40,8 +41,10 @@
 import org.tweetyproject.logics.fol.syntax.Negation;
 import org.tweetyproject.web.TweetyServer;
 
-import org.codehaus.jettison.json.JSONException;
-import org.codehaus.jettison.json.JSONObject;
+
+
+import org.json.JSONObject;
+import org.json.JSONException;
 
 /**
  * Web service for defeasible logic programming.